Gene : Bradi3g52447 B. distachyon v3.1
Genomic Order:  6515 Name:  ? Bradi3g52447
Secondary Identifier:  ? PAC:32822378
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g52447 0.5kb upstream 0.5kb upstream 3751 true Bd3: 53106208-53109958 Brachypodium distachyon
Bradi3g52447 0.5kb upstream 0.5kb upstream 500 false Bd3: 53106208-53106707 Brachypodium distachyon
Bradi3g52447 0.5kb downstream 0.5kb downstream 3751 true Bd3: 53106708-53110458 Brachypodium distachyon
Bradi3g52447 0.5kb downstream 0.5kb downstream 500 false Bd3: 53109959-53110458 Brachypodium distachyon
Bradi3g52447 1.0kb upstream 1.0kb upstream 4251 true Bd3: 53105708-53109958 Brachypodium distachyon
Bradi3g52447 1.0kb upstream 1.0kb upstream 1000 false Bd3: 53105708-53106707 Brachypodium distachyon
Bradi3g52447 1.0kb downstream 1.0kb downstream 4251 true Bd3: 53106708-53110958 Brachypodium distachyon
Bradi3g52447 1.0kb downstream 1.0kb downstream 1000 false Bd3: 53109959-53110958 Brachypodium distachyon
Bradi3g52447 2.0kb upstream 2.0kb upstream 5251 true Bd3: 53104708-53109958 Brachypodium distachyon
Bradi3g52447 2.0kb upstream 2.0kb upstream 2000 false Bd3: 53104708-53106707 Brachypodium distachyon
Bradi3g52447 2.0kb downstream 2.0kb downstream 5251 true Bd3: 53106708-53111958 Brachypodium distachyon
Bradi3g52447 2.0kb downstream 2.0kb downstream 2000 false Bd3: 53109959-53111958 Brachypodium distachyon
Bradi3g52447 5.0kb upstream 5.0kb upstream 8251 true Bd3: 53101708-53109958 Brachypodium distachyon
Bradi3g52447 5.0kb upstream 5.0kb upstream 5000 false Bd3: 53101708-53106707 Brachypodium distachyon
Bradi3g52447 5.0kb downstream 5.0kb downstream 8251 true Bd3: 53106708-53114958 Brachypodium distachyon
Bradi3g52447 5.0kb downstream 5.0kb downstream 5000 false Bd3: 53109959-53114958 Brachypodium distachyon
Bradi3g52447 10.0kb upstream 10.0kb upstream 13251 true Bd3: 53096708-53109958 Brachypodium distachyon
Bradi3g52447 10.0kb upstream 10.0kb upstream 10000 false Bd3: 53096708-53106707 Brachypodium distachyon
Bradi3g52447 10.0kb downstream 10.0kb downstream 13251 true Bd3: 53106708-53119958 Brachypodium distachyon
Bradi3g52447 10.0kb downstream 10.0kb downstream 10000 false Bd3: 53109959-53119958 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569675 5269 Grass View MSA
122049048 5273 Angiosperm View MSA
121351117 5274 Embryophyte View MSA
123382012 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.724     High  
cufflinks 17.653     High  
cufflinks 15.894     High  
cufflinks 15.751     High  
cufflinks 3.209        
cufflinks 14.78     High  
cufflinks 13.832     High  
cufflinks 10.466     High  
cufflinks 10.176     High  
cufflinks 11.091     High  
cufflinks 0.162       Low
cufflinks 12.444     High  
cufflinks 0.206       Low
cufflinks 0.139       Low
cufflinks 2.992        
cufflinks 15.348     High  
cufflinks 10.052        
cufflinks 35.578     High High
cufflinks 6.786        
cufflinks 0.268       Low
cufflinks 8.515        
cufflinks 13.087     High  
cufflinks 8.626        
cufflinks 8.607        
cufflinks 13.78     High  
cufflinks 15.671     High  
cufflinks 0.207       Low
cufflinks 11.973     High  
cufflinks 11.663     High  
cufflinks 15.338     High  

0 Strain