Gene : Bradi3g52767 B. distachyon v3.1
Defline:  (1 of 1) PTHR16517:SF41 - TUBBY-LIKE F-BOX PROTEIN 6 Genomic Order:  6554
Name:  ? Bradi3g52767 Secondary Identifier:  ? PAC:32815844
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g52767 0.5kb upstream 0.5kb upstream 3682 true Bd3: 53382603-53386284 Brachypodium distachyon
Bradi3g52767 0.5kb upstream 0.5kb upstream 500 false Bd3: 53382603-53383102 Brachypodium distachyon
Bradi3g52767 0.5kb downstream 0.5kb downstream 3682 true Bd3: 53383103-53386784 Brachypodium distachyon
Bradi3g52767 0.5kb downstream 0.5kb downstream 500 false Bd3: 53386285-53386784 Brachypodium distachyon
Bradi3g52767 1.0kb upstream 1.0kb upstream 4182 true Bd3: 53382103-53386284 Brachypodium distachyon
Bradi3g52767 1.0kb upstream 1.0kb upstream 1000 false Bd3: 53382103-53383102 Brachypodium distachyon
Bradi3g52767 1.0kb downstream 1.0kb downstream 4182 true Bd3: 53383103-53387284 Brachypodium distachyon
Bradi3g52767 1.0kb downstream 1.0kb downstream 1000 false Bd3: 53386285-53387284 Brachypodium distachyon
Bradi3g52767 2.0kb upstream 2.0kb upstream 5182 true Bd3: 53381103-53386284 Brachypodium distachyon
Bradi3g52767 2.0kb upstream 2.0kb upstream 2000 false Bd3: 53381103-53383102 Brachypodium distachyon
Bradi3g52767 2.0kb downstream 2.0kb downstream 5182 true Bd3: 53383103-53388284 Brachypodium distachyon
Bradi3g52767 2.0kb downstream 2.0kb downstream 2000 false Bd3: 53386285-53388284 Brachypodium distachyon
Bradi3g52767 5.0kb upstream 5.0kb upstream 8182 true Bd3: 53378103-53386284 Brachypodium distachyon
Bradi3g52767 5.0kb upstream 5.0kb upstream 5000 false Bd3: 53378103-53383102 Brachypodium distachyon
Bradi3g52767 5.0kb downstream 5.0kb downstream 8182 true Bd3: 53383103-53391284 Brachypodium distachyon
Bradi3g52767 5.0kb downstream 5.0kb downstream 5000 false Bd3: 53386285-53391284 Brachypodium distachyon
Bradi3g52767 10.0kb upstream 10.0kb upstream 13182 true Bd3: 53373103-53386284 Brachypodium distachyon
Bradi3g52767 10.0kb upstream 10.0kb upstream 10000 false Bd3: 53373103-53383102 Brachypodium distachyon
Bradi3g52767 10.0kb downstream 10.0kb downstream 13182 true Bd3: 53383103-53396284 Brachypodium distachyon
Bradi3g52767 10.0kb downstream 10.0kb downstream 10000 false Bd3: 53386285-53396284 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124586328 5269 Grass View MSA
122049170 5273 Angiosperm View MSA
123429062 5275 Viridiplantae View MSA
121348967 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.687     High High
cufflinks 11.343     High  
cufflinks 12.212     High  
cufflinks 10.378        
cufflinks 9.134     High  
cufflinks 9.533     High  
cufflinks 10.48     High  
cufflinks 11.099     High  
cufflinks 10.249     High  
cufflinks 11.195     High  
cufflinks 6.354       Low
cufflinks 8.069        
cufflinks 6.224       Low
cufflinks 6.857       Low
cufflinks 8.374        
cufflinks 9.951     High  
cufflinks 10.767        
cufflinks 15.142     High High
cufflinks 19.628     High High
cufflinks 4.756       Low
cufflinks 13.336     High  
cufflinks 11.959     High  
cufflinks 10.601     High  
cufflinks 8.896        
cufflinks 9.001        
cufflinks 12.139     High  
cufflinks 5.562       Low
cufflinks 12.939     High  
cufflinks 13.483     High  
cufflinks 11.258        

0 Strain