Gene : Bradi3g53080 B. distachyon v3.1
Genomic Order:  6586 Name:  ? Bradi3g53080
Secondary Identifier:  ? PAC:32821238
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g53080 0.5kb upstream 0.5kb upstream 5504 true Bd3: 53615595-53621098 Brachypodium distachyon
Bradi3g53080 0.5kb upstream 0.5kb upstream 500 false Bd3: 53615595-53616094 Brachypodium distachyon
Bradi3g53080 0.5kb downstream 0.5kb downstream 5504 true Bd3: 53616095-53621598 Brachypodium distachyon
Bradi3g53080 0.5kb downstream 0.5kb downstream 500 false Bd3: 53621099-53621598 Brachypodium distachyon
Bradi3g53080 1.0kb upstream 1.0kb upstream 6004 true Bd3: 53615095-53621098 Brachypodium distachyon
Bradi3g53080 1.0kb upstream 1.0kb upstream 1000 false Bd3: 53615095-53616094 Brachypodium distachyon
Bradi3g53080 1.0kb downstream 1.0kb downstream 6004 true Bd3: 53616095-53622098 Brachypodium distachyon
Bradi3g53080 1.0kb downstream 1.0kb downstream 1000 false Bd3: 53621099-53622098 Brachypodium distachyon
Bradi3g53080 2.0kb upstream 2.0kb upstream 7004 true Bd3: 53614095-53621098 Brachypodium distachyon
Bradi3g53080 2.0kb upstream 2.0kb upstream 2000 false Bd3: 53614095-53616094 Brachypodium distachyon
Bradi3g53080 2.0kb downstream 2.0kb downstream 7004 true Bd3: 53616095-53623098 Brachypodium distachyon
Bradi3g53080 2.0kb downstream 2.0kb downstream 2000 false Bd3: 53621099-53623098 Brachypodium distachyon
Bradi3g53080 5.0kb upstream 5.0kb upstream 10004 true Bd3: 53611095-53621098 Brachypodium distachyon
Bradi3g53080 5.0kb upstream 5.0kb upstream 5000 false Bd3: 53611095-53616094 Brachypodium distachyon
Bradi3g53080 5.0kb downstream 5.0kb downstream 10004 true Bd3: 53616095-53626098 Brachypodium distachyon
Bradi3g53080 5.0kb downstream 5.0kb downstream 5000 false Bd3: 53621099-53626098 Brachypodium distachyon
Bradi3g53080 10.0kb upstream 10.0kb upstream 15004 true Bd3: 53606095-53621098 Brachypodium distachyon
Bradi3g53080 10.0kb upstream 10.0kb upstream 10000 false Bd3: 53606095-53616094 Brachypodium distachyon
Bradi3g53080 10.0kb downstream 10.0kb downstream 15004 true Bd3: 53616095-53631098 Brachypodium distachyon
Bradi3g53080 10.0kb downstream 10.0kb downstream 10000 false Bd3: 53621099-53631098 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570141 5269 Grass View MSA
122043438 5273 Angiosperm View MSA
121310125 5274 Embryophyte View MSA
123347699 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.083        
cufflinks 0.099        
cufflinks 0.107        
cufflinks 0.172        
cufflinks 0.039     Low  
cufflinks 0.107        
cufflinks 0.101        
cufflinks 0.085        
cufflinks 0.134        
cufflinks 0.146        
cufflinks 0.017     Low Low
cufflinks 0.081     Low  
cufflinks 0.018     Low Low
cufflinks 0.015     Low Low
cufflinks 0.055     Low  
cufflinks 0.119        
cufflinks 0.195        
cufflinks 0.124     Low  
cufflinks 0.146     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.254       High
cufflinks 0.09     Low  
cufflinks 0.106        
cufflinks 0.114        
cufflinks 0.163        
cufflinks 0.098     Low  
cufflinks 0.01     Low Low
cufflinks 0.161        
cufflinks 0.245       High
cufflinks 0.159        

0 Strain