Gene : Bradi4g29430 B. distachyon v3.1
Defline:  (1 of 5) PF11833 - Protein of unknown function (DUF3353) (DUF3353) Genomic Order:  3785
Name:  ? Bradi4g29430 Secondary Identifier:  ? PAC:32783276
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g29430 0.5kb upstream 0.5kb upstream 4882 true Bd4: 34749476-34754357 Brachypodium distachyon
Bradi4g29430 0.5kb upstream 0.5kb upstream 500 false Bd4: 34749476-34749975 Brachypodium distachyon
Bradi4g29430 0.5kb downstream 0.5kb downstream 4882 true Bd4: 34749976-34754857 Brachypodium distachyon
Bradi4g29430 0.5kb downstream 0.5kb downstream 500 false Bd4: 34754358-34754857 Brachypodium distachyon
Bradi4g29430 1.0kb upstream 1.0kb upstream 5382 true Bd4: 34748976-34754357 Brachypodium distachyon
Bradi4g29430 1.0kb upstream 1.0kb upstream 1000 false Bd4: 34748976-34749975 Brachypodium distachyon
Bradi4g29430 1.0kb downstream 1.0kb downstream 5382 true Bd4: 34749976-34755357 Brachypodium distachyon
Bradi4g29430 1.0kb downstream 1.0kb downstream 1000 false Bd4: 34754358-34755357 Brachypodium distachyon
Bradi4g29430 2.0kb upstream 2.0kb upstream 6382 true Bd4: 34747976-34754357 Brachypodium distachyon
Bradi4g29430 2.0kb upstream 2.0kb upstream 2000 false Bd4: 34747976-34749975 Brachypodium distachyon
Bradi4g29430 2.0kb downstream 2.0kb downstream 6382 true Bd4: 34749976-34756357 Brachypodium distachyon
Bradi4g29430 2.0kb downstream 2.0kb downstream 2000 false Bd4: 34754358-34756357 Brachypodium distachyon
Bradi4g29430 5.0kb upstream 5.0kb upstream 9382 true Bd4: 34744976-34754357 Brachypodium distachyon
Bradi4g29430 5.0kb upstream 5.0kb upstream 5000 false Bd4: 34744976-34749975 Brachypodium distachyon
Bradi4g29430 5.0kb downstream 5.0kb downstream 9382 true Bd4: 34749976-34759357 Brachypodium distachyon
Bradi4g29430 5.0kb downstream 5.0kb downstream 5000 false Bd4: 34754358-34759357 Brachypodium distachyon
Bradi4g29430 10.0kb upstream 10.0kb upstream 14382 true Bd4: 34739976-34754357 Brachypodium distachyon
Bradi4g29430 10.0kb upstream 10.0kb upstream 10000 false Bd4: 34739976-34749975 Brachypodium distachyon
Bradi4g29430 10.0kb downstream 10.0kb downstream 14382 true Bd4: 34749976-34764357 Brachypodium distachyon
Bradi4g29430 10.0kb downstream 10.0kb downstream 10000 false Bd4: 34754358-34764357 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577363 5269 Grass View MSA
122050900 5273 Angiosperm View MSA
121343809 5274 Embryophyte View MSA
123427732 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.002     High  
cufflinks 19.293     High High
cufflinks 15.073     High  
cufflinks 19.968     High High
cufflinks 5.871        
cufflinks 15.558     High  
cufflinks 18.717     High High
cufflinks 10.838     High  
cufflinks 12.656     High  
cufflinks 14.817     High  
cufflinks 6.044        
cufflinks 11.448     High  
cufflinks 5.813        
cufflinks 6.993        
cufflinks 8.261        
cufflinks 15.051     High  
cufflinks 12.684     High  
cufflinks 2.929       Low
cufflinks 9.142        
cufflinks 3.534       Low
cufflinks 8.426        
cufflinks 12.144     High  
cufflinks 9.378     High  
cufflinks 12.152     High  
cufflinks 16.87     High  
cufflinks 14.586     High  
cufflinks 4.994       Low
cufflinks 14.157     High  
cufflinks 13.891     High  
cufflinks 13.925     High  

0 Strain