Gene : Bradi3g53270 B. distachyon v3.1
Defline:  (1 of 1) PTHR15348//PTHR15348:SF4 - AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT Genomic Order:  6614
Name:  ? Bradi3g53270 Secondary Identifier:  ? PAC:32814506
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g53270 0.5kb upstream 0.5kb upstream 5384 true Bd3: 53758407-53763790 Brachypodium distachyon
Bradi3g53270 0.5kb upstream 0.5kb upstream 500 false Bd3: 53763291-53763790 Brachypodium distachyon
Bradi3g53270 0.5kb downstream 0.5kb downstream 5384 true Bd3: 53757907-53763290 Brachypodium distachyon
Bradi3g53270 0.5kb downstream 0.5kb downstream 500 false Bd3: 53757907-53758406 Brachypodium distachyon
Bradi3g53270 1.0kb upstream 1.0kb upstream 5884 true Bd3: 53758407-53764290 Brachypodium distachyon
Bradi3g53270 1.0kb upstream 1.0kb upstream 1000 false Bd3: 53763291-53764290 Brachypodium distachyon
Bradi3g53270 1.0kb downstream 1.0kb downstream 5884 true Bd3: 53757407-53763290 Brachypodium distachyon
Bradi3g53270 1.0kb downstream 1.0kb downstream 1000 false Bd3: 53757407-53758406 Brachypodium distachyon
Bradi3g53270 2.0kb upstream 2.0kb upstream 6884 true Bd3: 53758407-53765290 Brachypodium distachyon
Bradi3g53270 2.0kb upstream 2.0kb upstream 2000 false Bd3: 53763291-53765290 Brachypodium distachyon
Bradi3g53270 2.0kb downstream 2.0kb downstream 6884 true Bd3: 53756407-53763290 Brachypodium distachyon
Bradi3g53270 2.0kb downstream 2.0kb downstream 2000 false Bd3: 53756407-53758406 Brachypodium distachyon
Bradi3g53270 5.0kb upstream 5.0kb upstream 9884 true Bd3: 53758407-53768290 Brachypodium distachyon
Bradi3g53270 5.0kb upstream 5.0kb upstream 5000 false Bd3: 53763291-53768290 Brachypodium distachyon
Bradi3g53270 5.0kb downstream 5.0kb downstream 9884 true Bd3: 53753407-53763290 Brachypodium distachyon
Bradi3g53270 5.0kb downstream 5.0kb downstream 5000 false Bd3: 53753407-53758406 Brachypodium distachyon
Bradi3g53270 10.0kb upstream 10.0kb upstream 14884 true Bd3: 53758407-53773290 Brachypodium distachyon
Bradi3g53270 10.0kb upstream 10.0kb upstream 10000 false Bd3: 53763291-53773290 Brachypodium distachyon
Bradi3g53270 10.0kb downstream 10.0kb downstream 14884 true Bd3: 53748407-53763290 Brachypodium distachyon
Bradi3g53270 10.0kb downstream 10.0kb downstream 10000 false Bd3: 53748407-53758406 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573161 5269 Grass View MSA
122045434 5273 Angiosperm View MSA
121346901 5274 Embryophyte View MSA
123426327 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.148       Low
cufflinks 4.035       High
cufflinks 4.491       High
cufflinks 4.309       High
cufflinks 2.211       Low
cufflinks 2.937        
cufflinks 3.216        
cufflinks 2.861        
cufflinks 2.958        
cufflinks 3.311        
cufflinks 3.892        
cufflinks 2.33        
cufflinks 2.849        
cufflinks 3.082        
cufflinks 2.557        
cufflinks 2.954        
cufflinks 2.37        
cufflinks 2.109       Low
cufflinks 3.021        
cufflinks 4.466       High
cufflinks 2.02       Low
cufflinks 3.665        
cufflinks 2.817        
cufflinks 2.826        
cufflinks 3.044        
cufflinks 4.389       High
cufflinks 3.954        
cufflinks 4.797       High
cufflinks 4.155       High
cufflinks 1.877       Low

0 Strain