Gene : Bradi3g53280 B. distachyon v3.1
Defline:  (1 of 1) PTHR14374 - FOIE GRAS Genomic Order:  6615
Name:  ? Bradi3g53280 Secondary Identifier:  ? PAC:32816654
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g53280 0.5kb upstream 0.5kb upstream 6740 true Bd3: 53764182-53770921 Brachypodium distachyon
Bradi3g53280 0.5kb upstream 0.5kb upstream 500 false Bd3: 53764182-53764681 Brachypodium distachyon
Bradi3g53280 0.5kb downstream 0.5kb downstream 6740 true Bd3: 53764682-53771421 Brachypodium distachyon
Bradi3g53280 0.5kb downstream 0.5kb downstream 500 false Bd3: 53770922-53771421 Brachypodium distachyon
Bradi3g53280 1.0kb upstream 1.0kb upstream 7240 true Bd3: 53763682-53770921 Brachypodium distachyon
Bradi3g53280 1.0kb upstream 1.0kb upstream 1000 false Bd3: 53763682-53764681 Brachypodium distachyon
Bradi3g53280 1.0kb downstream 1.0kb downstream 7240 true Bd3: 53764682-53771921 Brachypodium distachyon
Bradi3g53280 1.0kb downstream 1.0kb downstream 1000 false Bd3: 53770922-53771921 Brachypodium distachyon
Bradi3g53280 2.0kb upstream 2.0kb upstream 8240 true Bd3: 53762682-53770921 Brachypodium distachyon
Bradi3g53280 2.0kb upstream 2.0kb upstream 2000 false Bd3: 53762682-53764681 Brachypodium distachyon
Bradi3g53280 2.0kb downstream 2.0kb downstream 8240 true Bd3: 53764682-53772921 Brachypodium distachyon
Bradi3g53280 2.0kb downstream 2.0kb downstream 2000 false Bd3: 53770922-53772921 Brachypodium distachyon
Bradi3g53280 5.0kb upstream 5.0kb upstream 11240 true Bd3: 53759682-53770921 Brachypodium distachyon
Bradi3g53280 5.0kb upstream 5.0kb upstream 5000 false Bd3: 53759682-53764681 Brachypodium distachyon
Bradi3g53280 5.0kb downstream 5.0kb downstream 11240 true Bd3: 53764682-53775921 Brachypodium distachyon
Bradi3g53280 5.0kb downstream 5.0kb downstream 5000 false Bd3: 53770922-53775921 Brachypodium distachyon
Bradi3g53280 10.0kb upstream 10.0kb upstream 16240 true Bd3: 53754682-53770921 Brachypodium distachyon
Bradi3g53280 10.0kb upstream 10.0kb upstream 10000 false Bd3: 53754682-53764681 Brachypodium distachyon
Bradi3g53280 10.0kb downstream 10.0kb downstream 16240 true Bd3: 53764682-53780921 Brachypodium distachyon
Bradi3g53280 10.0kb downstream 10.0kb downstream 10000 false Bd3: 53770922-53780921 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578930 5269 Grass View MSA
122043312 5273 Angiosperm View MSA
121344213 5274 Embryophyte View MSA
123424379 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.496        
cufflinks 7.436        
cufflinks 7.959        
cufflinks 4.658        
cufflinks 3.169        
cufflinks 7.09        
cufflinks 6.322        
cufflinks 5.495        
cufflinks 6.726        
cufflinks 3.319        
cufflinks 4.507        
cufflinks 7.661        
cufflinks 4.213        
cufflinks 3.359        
cufflinks 4.374        
cufflinks 7.74        
cufflinks 3.002       Low
cufflinks 14.503     High High
cufflinks 5.727        
cufflinks 3.067        
cufflinks 4.661        
cufflinks 8.117        
cufflinks 5.845        
cufflinks 5.954        
cufflinks 5.296        
cufflinks 6.145        
cufflinks 4.915        
cufflinks 5.993        
cufflinks 6.573        
cufflinks 9.691       High

0 Strain