Gene : Bradi3g53130 B. distachyon v3.1
Defline:  (1 of 1) PTHR10803//PTHR10803:SF2 - ARSENICAL PUMP-DRIVING ATPASE ARSENITE-TRANSLOCATING ATPASE Genomic Order:  6594
Name:  ? Bradi3g53130 Secondary Identifier:  ? PAC:32819787
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g53130 0.5kb upstream 0.5kb upstream 3960 true Bd3: 53655580-53659539 Brachypodium distachyon
Bradi3g53130 0.5kb upstream 0.5kb upstream 500 false Bd3: 53655580-53656079 Brachypodium distachyon
Bradi3g53130 0.5kb downstream 0.5kb downstream 3960 true Bd3: 53656080-53660039 Brachypodium distachyon
Bradi3g53130 0.5kb downstream 0.5kb downstream 500 false Bd3: 53659540-53660039 Brachypodium distachyon
Bradi3g53130 1.0kb upstream 1.0kb upstream 4460 true Bd3: 53655080-53659539 Brachypodium distachyon
Bradi3g53130 1.0kb upstream 1.0kb upstream 1000 false Bd3: 53655080-53656079 Brachypodium distachyon
Bradi3g53130 1.0kb downstream 1.0kb downstream 4460 true Bd3: 53656080-53660539 Brachypodium distachyon
Bradi3g53130 1.0kb downstream 1.0kb downstream 1000 false Bd3: 53659540-53660539 Brachypodium distachyon
Bradi3g53130 2.0kb upstream 2.0kb upstream 5460 true Bd3: 53654080-53659539 Brachypodium distachyon
Bradi3g53130 2.0kb upstream 2.0kb upstream 2000 false Bd3: 53654080-53656079 Brachypodium distachyon
Bradi3g53130 2.0kb downstream 2.0kb downstream 5460 true Bd3: 53656080-53661539 Brachypodium distachyon
Bradi3g53130 2.0kb downstream 2.0kb downstream 2000 false Bd3: 53659540-53661539 Brachypodium distachyon
Bradi3g53130 5.0kb upstream 5.0kb upstream 8460 true Bd3: 53651080-53659539 Brachypodium distachyon
Bradi3g53130 5.0kb upstream 5.0kb upstream 5000 false Bd3: 53651080-53656079 Brachypodium distachyon
Bradi3g53130 5.0kb downstream 5.0kb downstream 8460 true Bd3: 53656080-53664539 Brachypodium distachyon
Bradi3g53130 5.0kb downstream 5.0kb downstream 5000 false Bd3: 53659540-53664539 Brachypodium distachyon
Bradi3g53130 10.0kb upstream 10.0kb upstream 13460 true Bd3: 53646080-53659539 Brachypodium distachyon
Bradi3g53130 10.0kb upstream 10.0kb upstream 10000 false Bd3: 53646080-53656079 Brachypodium distachyon
Bradi3g53130 10.0kb downstream 10.0kb downstream 13460 true Bd3: 53656080-53669539 Brachypodium distachyon
Bradi3g53130 10.0kb downstream 10.0kb downstream 10000 false Bd3: 53659540-53669539 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582098 5269 Grass View MSA
122045230 5273 Angiosperm View MSA
121344575 5274 Embryophyte View MSA
123380067 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.335        
cufflinks 8.404       High
cufflinks 7.134       High
cufflinks 7.934       High
cufflinks 5.359        
cufflinks 6.034        
cufflinks 7.168       High
cufflinks 4.078        
cufflinks 4.613        
cufflinks 4.566        
cufflinks 2.707       Low
cufflinks 5.113        
cufflinks 2.921       Low
cufflinks 2.186       Low
cufflinks 3.981        
cufflinks 6.476        
cufflinks 4.353        
cufflinks 3.699        
cufflinks 4.075        
cufflinks 1.673       Low
cufflinks 4.178        
cufflinks 5.994        
cufflinks 3.801        
cufflinks 3.696        
cufflinks 5.589        
cufflinks 7.157       High
cufflinks 2.705       Low
cufflinks 6.325        
cufflinks 5.674        
cufflinks 7.023       High

0 Strain