Gene : Bradi3g53310 B. distachyon v3.1
Defline:  (1 of 1) PTHR10366//PTHR10366:SF355 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // SUBFAMILY NOT NAMED Genomic Order:  6618
Name:  ? Bradi3g53310 Secondary Identifier:  ? PAC:32821108
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g53310 0.5kb upstream 0.5kb upstream 4914 true Bd3: 53776402-53781315 Brachypodium distachyon
Bradi3g53310 0.5kb upstream 0.5kb upstream 500 false Bd3: 53776402-53776901 Brachypodium distachyon
Bradi3g53310 0.5kb downstream 0.5kb downstream 4914 true Bd3: 53776902-53781815 Brachypodium distachyon
Bradi3g53310 0.5kb downstream 0.5kb downstream 500 false Bd3: 53781316-53781815 Brachypodium distachyon
Bradi3g53310 1.0kb upstream 1.0kb upstream 5414 true Bd3: 53775902-53781315 Brachypodium distachyon
Bradi3g53310 1.0kb upstream 1.0kb upstream 1000 false Bd3: 53775902-53776901 Brachypodium distachyon
Bradi3g53310 1.0kb downstream 1.0kb downstream 5414 true Bd3: 53776902-53782315 Brachypodium distachyon
Bradi3g53310 1.0kb downstream 1.0kb downstream 1000 false Bd3: 53781316-53782315 Brachypodium distachyon
Bradi3g53310 2.0kb upstream 2.0kb upstream 6414 true Bd3: 53774902-53781315 Brachypodium distachyon
Bradi3g53310 2.0kb upstream 2.0kb upstream 2000 false Bd3: 53774902-53776901 Brachypodium distachyon
Bradi3g53310 2.0kb downstream 2.0kb downstream 6414 true Bd3: 53776902-53783315 Brachypodium distachyon
Bradi3g53310 2.0kb downstream 2.0kb downstream 2000 false Bd3: 53781316-53783315 Brachypodium distachyon
Bradi3g53310 5.0kb upstream 5.0kb upstream 9414 true Bd3: 53771902-53781315 Brachypodium distachyon
Bradi3g53310 5.0kb upstream 5.0kb upstream 5000 false Bd3: 53771902-53776901 Brachypodium distachyon
Bradi3g53310 5.0kb downstream 5.0kb downstream 9414 true Bd3: 53776902-53786315 Brachypodium distachyon
Bradi3g53310 5.0kb downstream 5.0kb downstream 5000 false Bd3: 53781316-53786315 Brachypodium distachyon
Bradi3g53310 10.0kb upstream 10.0kb upstream 14414 true Bd3: 53766902-53781315 Brachypodium distachyon
Bradi3g53310 10.0kb upstream 10.0kb upstream 10000 false Bd3: 53766902-53776901 Brachypodium distachyon
Bradi3g53310 10.0kb downstream 10.0kb downstream 14414 true Bd3: 53776902-53791315 Brachypodium distachyon
Bradi3g53310 10.0kb downstream 10.0kb downstream 10000 false Bd3: 53781316-53791315 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571759 5269 Grass View MSA
122044697 5273 Angiosperm View MSA
121343909 5274 Embryophyte View MSA
123427810 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.729        
cufflinks 0.833        
cufflinks 0.857        
cufflinks 0.846        
cufflinks 0.571        
cufflinks 0.8        
cufflinks 0.748        
cufflinks 0.786        
cufflinks 0.797        
cufflinks 0.73        
cufflinks 0.344       Low
cufflinks 0.852        
cufflinks 0.509        
cufflinks 0.369       Low
cufflinks 0.737        
cufflinks 0.748        
cufflinks 0.764        
cufflinks 1.403       High
cufflinks 0.559        
cufflinks 0.233       Low
cufflinks 0.979        
cufflinks 0.85        
cufflinks 0.721        
cufflinks 0.757        
cufflinks 0.766        
cufflinks 0.784        
cufflinks 0.658        
cufflinks 0.814        
cufflinks 0.867        
cufflinks 1.224       High

0 Strain