Gene : Bradi3g53850 B. distachyon v3.1
Defline:  (1 of 1) K17908 - autophagy-related protein 18 (WIPI, ATG18) Genomic Order:  6681
Name:  ? Bradi3g53850 Secondary Identifier:  ? PAC:32814348
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g53850 0.5kb upstream 0.5kb upstream 5339 true Bd3: 54201173-54206511 Brachypodium distachyon
Bradi3g53850 0.5kb upstream 0.5kb upstream 500 false Bd3: 54206012-54206511 Brachypodium distachyon
Bradi3g53850 0.5kb downstream 0.5kb downstream 5339 true Bd3: 54200673-54206011 Brachypodium distachyon
Bradi3g53850 0.5kb downstream 0.5kb downstream 500 false Bd3: 54200673-54201172 Brachypodium distachyon
Bradi3g53850 1.0kb upstream 1.0kb upstream 5839 true Bd3: 54201173-54207011 Brachypodium distachyon
Bradi3g53850 1.0kb upstream 1.0kb upstream 1000 false Bd3: 54206012-54207011 Brachypodium distachyon
Bradi3g53850 1.0kb downstream 1.0kb downstream 5839 true Bd3: 54200173-54206011 Brachypodium distachyon
Bradi3g53850 1.0kb downstream 1.0kb downstream 1000 false Bd3: 54200173-54201172 Brachypodium distachyon
Bradi3g53850 2.0kb upstream 2.0kb upstream 6839 true Bd3: 54201173-54208011 Brachypodium distachyon
Bradi3g53850 2.0kb upstream 2.0kb upstream 2000 false Bd3: 54206012-54208011 Brachypodium distachyon
Bradi3g53850 2.0kb downstream 2.0kb downstream 6839 true Bd3: 54199173-54206011 Brachypodium distachyon
Bradi3g53850 2.0kb downstream 2.0kb downstream 2000 false Bd3: 54199173-54201172 Brachypodium distachyon
Bradi3g53850 5.0kb upstream 5.0kb upstream 9839 true Bd3: 54201173-54211011 Brachypodium distachyon
Bradi3g53850 5.0kb upstream 5.0kb upstream 5000 false Bd3: 54206012-54211011 Brachypodium distachyon
Bradi3g53850 5.0kb downstream 5.0kb downstream 9839 true Bd3: 54196173-54206011 Brachypodium distachyon
Bradi3g53850 5.0kb downstream 5.0kb downstream 5000 false Bd3: 54196173-54201172 Brachypodium distachyon
Bradi3g53850 10.0kb upstream 10.0kb upstream 14839 true Bd3: 54201173-54216011 Brachypodium distachyon
Bradi3g53850 10.0kb upstream 10.0kb upstream 10000 false Bd3: 54206012-54216011 Brachypodium distachyon
Bradi3g53850 10.0kb downstream 10.0kb downstream 14839 true Bd3: 54191173-54206011 Brachypodium distachyon
Bradi3g53850 10.0kb downstream 10.0kb downstream 10000 false Bd3: 54191173-54201172 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574203 5269 Grass View MSA
122046109 5273 Angiosperm View MSA
121345292 5274 Embryophyte View MSA
123426742 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.4       Low
cufflinks 0.618        
cufflinks 0.772        
cufflinks 0.617        
cufflinks 0.548        
cufflinks 0.623        
cufflinks 0.544       Low
cufflinks 0.587        
cufflinks 0.6        
cufflinks 0.861       High
cufflinks 0.732        
cufflinks 0.771        
cufflinks 0.725        
cufflinks 0.598        
cufflinks 0.657        
cufflinks 0.561        
cufflinks 0.478       Low
cufflinks 0.868       High
cufflinks 0.62        
cufflinks 0.842       High
cufflinks 0.651        
cufflinks 0.787        
cufflinks 0.621        
cufflinks 0.57        
cufflinks 0.641        
cufflinks 0.79        
cufflinks 0.824       High
cufflinks 0.79        
cufflinks 0.813        
cufflinks 0.724        

0 Strain