Gene : Bradi3g53770 B. distachyon v3.1
Defline:  (1 of 2) K15161 - cyclin C (CCNC, SSN8) Genomic Order:  6671
Name:  ? Bradi3g53770 Secondary Identifier:  ? PAC:32822059
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g53770 0.5kb upstream 0.5kb upstream 9475 true Bd3: 54124379-54133853 Brachypodium distachyon
Bradi3g53770 0.5kb upstream 0.5kb upstream 500 false Bd3: 54124379-54124878 Brachypodium distachyon
Bradi3g53770 0.5kb downstream 0.5kb downstream 9475 true Bd3: 54124879-54134353 Brachypodium distachyon
Bradi3g53770 0.5kb downstream 0.5kb downstream 500 false Bd3: 54133854-54134353 Brachypodium distachyon
Bradi3g53770 1.0kb upstream 1.0kb upstream 9975 true Bd3: 54123879-54133853 Brachypodium distachyon
Bradi3g53770 1.0kb upstream 1.0kb upstream 1000 false Bd3: 54123879-54124878 Brachypodium distachyon
Bradi3g53770 1.0kb downstream 1.0kb downstream 9975 true Bd3: 54124879-54134853 Brachypodium distachyon
Bradi3g53770 1.0kb downstream 1.0kb downstream 1000 false Bd3: 54133854-54134853 Brachypodium distachyon
Bradi3g53770 2.0kb upstream 2.0kb upstream 10975 true Bd3: 54122879-54133853 Brachypodium distachyon
Bradi3g53770 2.0kb upstream 2.0kb upstream 2000 false Bd3: 54122879-54124878 Brachypodium distachyon
Bradi3g53770 2.0kb downstream 2.0kb downstream 10975 true Bd3: 54124879-54135853 Brachypodium distachyon
Bradi3g53770 2.0kb downstream 2.0kb downstream 2000 false Bd3: 54133854-54135853 Brachypodium distachyon
Bradi3g53770 5.0kb upstream 5.0kb upstream 13975 true Bd3: 54119879-54133853 Brachypodium distachyon
Bradi3g53770 5.0kb upstream 5.0kb upstream 5000 false Bd3: 54119879-54124878 Brachypodium distachyon
Bradi3g53770 5.0kb downstream 5.0kb downstream 13975 true Bd3: 54124879-54138853 Brachypodium distachyon
Bradi3g53770 5.0kb downstream 5.0kb downstream 5000 false Bd3: 54133854-54138853 Brachypodium distachyon
Bradi3g53770 10.0kb upstream 10.0kb upstream 18975 true Bd3: 54114879-54133853 Brachypodium distachyon
Bradi3g53770 10.0kb upstream 10.0kb upstream 10000 false Bd3: 54114879-54124878 Brachypodium distachyon
Bradi3g53770 10.0kb downstream 10.0kb downstream 18975 true Bd3: 54124879-54143853 Brachypodium distachyon
Bradi3g53770 10.0kb downstream 10.0kb downstream 10000 false Bd3: 54133854-54143853 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570436 5269 Grass View MSA
122042556 5273 Angiosperm View MSA
123429117 5275 Viridiplantae View MSA
121346319 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.534        
cufflinks 0.601        
cufflinks 0.577        
cufflinks 0.649        
cufflinks 0.486        
cufflinks 0.562        
cufflinks 0.52        
cufflinks 0.45        
cufflinks 0.546        
cufflinks 0.662        
cufflinks 0.345       Low
cufflinks 0.496        
cufflinks 0.383        
cufflinks 0.384        
cufflinks 0.368        
cufflinks 0.598        
cufflinks 0.735        
cufflinks 0.884       High
cufflinks 0.73        
cufflinks 0.241       Low
cufflinks 0.828       High
cufflinks 0.531        
cufflinks 0.415        
cufflinks 0.588        
cufflinks 0.617        
cufflinks 0.725        
cufflinks 0.329       Low
cufflinks 0.609        
cufflinks 0.56        
cufflinks 0.75       High

0 Strain