Gene : Bradi3g53870 B. distachyon v3.1
Defline:  (1 of 1) PTHR10383//PTHR10383:SF25 - SERINE INCORPORATOR // SERINC-DOMAIN CONTAINING SERINE AND SPHINGOLIPID BIOSYNTHESIS PROTEIN Genomic Order:  6684
Name:  ? Bradi3g53870 Secondary Identifier:  ? PAC:32821028
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g53870 0.5kb upstream 0.5kb upstream 3941 true Bd3: 54224227-54228167 Brachypodium distachyon
Bradi3g53870 0.5kb upstream 0.5kb upstream 500 false Bd3: 54227668-54228167 Brachypodium distachyon
Bradi3g53870 0.5kb downstream 0.5kb downstream 3941 true Bd3: 54223727-54227667 Brachypodium distachyon
Bradi3g53870 0.5kb downstream 0.5kb downstream 500 false Bd3: 54223727-54224226 Brachypodium distachyon
Bradi3g53870 1.0kb upstream 1.0kb upstream 4441 true Bd3: 54224227-54228667 Brachypodium distachyon
Bradi3g53870 1.0kb upstream 1.0kb upstream 1000 false Bd3: 54227668-54228667 Brachypodium distachyon
Bradi3g53870 1.0kb downstream 1.0kb downstream 4441 true Bd3: 54223227-54227667 Brachypodium distachyon
Bradi3g53870 1.0kb downstream 1.0kb downstream 1000 false Bd3: 54223227-54224226 Brachypodium distachyon
Bradi3g53870 2.0kb upstream 2.0kb upstream 5441 true Bd3: 54224227-54229667 Brachypodium distachyon
Bradi3g53870 2.0kb upstream 2.0kb upstream 2000 false Bd3: 54227668-54229667 Brachypodium distachyon
Bradi3g53870 2.0kb downstream 2.0kb downstream 5441 true Bd3: 54222227-54227667 Brachypodium distachyon
Bradi3g53870 2.0kb downstream 2.0kb downstream 2000 false Bd3: 54222227-54224226 Brachypodium distachyon
Bradi3g53870 5.0kb upstream 5.0kb upstream 8441 true Bd3: 54224227-54232667 Brachypodium distachyon
Bradi3g53870 5.0kb upstream 5.0kb upstream 5000 false Bd3: 54227668-54232667 Brachypodium distachyon
Bradi3g53870 5.0kb downstream 5.0kb downstream 8441 true Bd3: 54219227-54227667 Brachypodium distachyon
Bradi3g53870 5.0kb downstream 5.0kb downstream 5000 false Bd3: 54219227-54224226 Brachypodium distachyon
Bradi3g53870 10.0kb upstream 10.0kb upstream 13441 true Bd3: 54224227-54237667 Brachypodium distachyon
Bradi3g53870 10.0kb upstream 10.0kb upstream 10000 false Bd3: 54227668-54237667 Brachypodium distachyon
Bradi3g53870 10.0kb downstream 10.0kb downstream 13441 true Bd3: 54214227-54227667 Brachypodium distachyon
Bradi3g53870 10.0kb downstream 10.0kb downstream 10000 false Bd3: 54214227-54224226 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582860 5269 Grass View MSA
122047921 5273 Angiosperm View MSA
121351702 5274 Embryophyte View MSA
123428628 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.75     High Low
cufflinks 44.587     High  
cufflinks 51.107     High  
cufflinks 37.201     High  
cufflinks 36.215     High  
cufflinks 42.58     High  
cufflinks 44.421     High  
cufflinks 41.762     High  
cufflinks 39.082     High  
cufflinks 39.729     High  
cufflinks 54.319     High  
cufflinks 48.872     High  
cufflinks 51.192     High  
cufflinks 47.172     High  
cufflinks 36.851     High  
cufflinks 46.267     High  
cufflinks 33.854     High  
cufflinks 65.724     High High
cufflinks 46.389     High  
cufflinks 26.566     High Low
cufflinks 66.535     High High
cufflinks 40.671     High  
cufflinks 39.162     High  
cufflinks 40.222     High  
cufflinks 35.389     High  
cufflinks 51.844     High  
cufflinks 61.698     High High
cufflinks 51.024     High  
cufflinks 46.198     High  
cufflinks 52.098     High  

0 Strain