Gene : Bradi3g54220 B. distachyon v3.1
Defline:  (1 of 1) PTHR10766:SF54 - ENDOMEMBRANE FAMILY PROTEIN 70 Genomic Order:  6726
Name:  ? Bradi3g54220 Secondary Identifier:  ? PAC:32812469
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g54220 0.5kb upstream 0.5kb upstream 3948 true Bd3: 54464147-54468094 Brachypodium distachyon
Bradi3g54220 0.5kb upstream 0.5kb upstream 500 false Bd3: 54467595-54468094 Brachypodium distachyon
Bradi3g54220 0.5kb downstream 0.5kb downstream 3948 true Bd3: 54463647-54467594 Brachypodium distachyon
Bradi3g54220 0.5kb downstream 0.5kb downstream 500 false Bd3: 54463647-54464146 Brachypodium distachyon
Bradi3g54220 1.0kb upstream 1.0kb upstream 4448 true Bd3: 54464147-54468594 Brachypodium distachyon
Bradi3g54220 1.0kb upstream 1.0kb upstream 1000 false Bd3: 54467595-54468594 Brachypodium distachyon
Bradi3g54220 1.0kb downstream 1.0kb downstream 4448 true Bd3: 54463147-54467594 Brachypodium distachyon
Bradi3g54220 1.0kb downstream 1.0kb downstream 1000 false Bd3: 54463147-54464146 Brachypodium distachyon
Bradi3g54220 2.0kb upstream 2.0kb upstream 5448 true Bd3: 54464147-54469594 Brachypodium distachyon
Bradi3g54220 2.0kb upstream 2.0kb upstream 2000 false Bd3: 54467595-54469594 Brachypodium distachyon
Bradi3g54220 2.0kb downstream 2.0kb downstream 5448 true Bd3: 54462147-54467594 Brachypodium distachyon
Bradi3g54220 2.0kb downstream 2.0kb downstream 2000 false Bd3: 54462147-54464146 Brachypodium distachyon
Bradi3g54220 5.0kb upstream 5.0kb upstream 8448 true Bd3: 54464147-54472594 Brachypodium distachyon
Bradi3g54220 5.0kb upstream 5.0kb upstream 5000 false Bd3: 54467595-54472594 Brachypodium distachyon
Bradi3g54220 5.0kb downstream 5.0kb downstream 8448 true Bd3: 54459147-54467594 Brachypodium distachyon
Bradi3g54220 5.0kb downstream 5.0kb downstream 5000 false Bd3: 54459147-54464146 Brachypodium distachyon
Bradi3g54220 10.0kb upstream 10.0kb upstream 13448 true Bd3: 54464147-54477594 Brachypodium distachyon
Bradi3g54220 10.0kb upstream 10.0kb upstream 10000 false Bd3: 54467595-54477594 Brachypodium distachyon
Bradi3g54220 10.0kb downstream 10.0kb downstream 13448 true Bd3: 54454147-54467594 Brachypodium distachyon
Bradi3g54220 10.0kb downstream 10.0kb downstream 10000 false Bd3: 54454147-54464146 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578725 5269 Grass View MSA
122045331 5273 Angiosperm View MSA
121349188 5274 Embryophyte View MSA
123426870 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.811     High  
cufflinks 27.205     High  
cufflinks 25.77     High  
cufflinks 24.697     High  
cufflinks 14.812     High  
cufflinks 25.15     High  
cufflinks 25.031     High  
cufflinks 37.702     High  
cufflinks 27.904     High  
cufflinks 15.658     High  
cufflinks 10.579     High  
cufflinks 36.567     High  
cufflinks 7.223       Low
cufflinks 6.074       Low
cufflinks 19.602     High  
cufflinks 30.643     High  
cufflinks 27.291     High  
cufflinks 63.443     High High
cufflinks 40.763     High  
cufflinks 4.504       Low
cufflinks 49.282     High High
cufflinks 24.981     High  
cufflinks 32.563     High  
cufflinks 27.461     High  
cufflinks 22.228     High  
cufflinks 21.68     High  
cufflinks 7.141       Low
cufflinks 21.03     High  
cufflinks 21.254     High  
cufflinks 50.076     High High

0 Strain