Gene : Bradi3g54190 B. distachyon v3.1
Defline:  (1 of 1) K02209 - DNA replication licensing factor MCM5 (MCM5, CDC46) Genomic Order:  6723
Name:  ? Bradi3g54190 Secondary Identifier:  ? PAC:32820918
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g54190 0.5kb upstream 0.5kb upstream 5443 true Bd3: 54446550-54451992 Brachypodium distachyon
Bradi3g54190 0.5kb upstream 0.5kb upstream 500 false Bd3: 54451493-54451992 Brachypodium distachyon
Bradi3g54190 0.5kb downstream 0.5kb downstream 5443 true Bd3: 54446050-54451492 Brachypodium distachyon
Bradi3g54190 0.5kb downstream 0.5kb downstream 500 false Bd3: 54446050-54446549 Brachypodium distachyon
Bradi3g54190 1.0kb upstream 1.0kb upstream 5943 true Bd3: 54446550-54452492 Brachypodium distachyon
Bradi3g54190 1.0kb upstream 1.0kb upstream 1000 false Bd3: 54451493-54452492 Brachypodium distachyon
Bradi3g54190 1.0kb downstream 1.0kb downstream 5943 true Bd3: 54445550-54451492 Brachypodium distachyon
Bradi3g54190 1.0kb downstream 1.0kb downstream 1000 false Bd3: 54445550-54446549 Brachypodium distachyon
Bradi3g54190 2.0kb upstream 2.0kb upstream 6943 true Bd3: 54446550-54453492 Brachypodium distachyon
Bradi3g54190 2.0kb upstream 2.0kb upstream 2000 false Bd3: 54451493-54453492 Brachypodium distachyon
Bradi3g54190 2.0kb downstream 2.0kb downstream 6943 true Bd3: 54444550-54451492 Brachypodium distachyon
Bradi3g54190 2.0kb downstream 2.0kb downstream 2000 false Bd3: 54444550-54446549 Brachypodium distachyon
Bradi3g54190 5.0kb upstream 5.0kb upstream 9943 true Bd3: 54446550-54456492 Brachypodium distachyon
Bradi3g54190 5.0kb upstream 5.0kb upstream 5000 false Bd3: 54451493-54456492 Brachypodium distachyon
Bradi3g54190 5.0kb downstream 5.0kb downstream 9943 true Bd3: 54441550-54451492 Brachypodium distachyon
Bradi3g54190 5.0kb downstream 5.0kb downstream 5000 false Bd3: 54441550-54446549 Brachypodium distachyon
Bradi3g54190 10.0kb upstream 10.0kb upstream 14943 true Bd3: 54446550-54461492 Brachypodium distachyon
Bradi3g54190 10.0kb upstream 10.0kb upstream 10000 false Bd3: 54451493-54461492 Brachypodium distachyon
Bradi3g54190 10.0kb downstream 10.0kb downstream 14943 true Bd3: 54436550-54451492 Brachypodium distachyon
Bradi3g54190 10.0kb downstream 10.0kb downstream 10000 false Bd3: 54436550-54446549 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572568 5269 Grass View MSA
122046085 5273 Angiosperm View MSA
123428876 5275 Viridiplantae View MSA
121346646 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.662        
cufflinks 9.904        
cufflinks 8.091        
cufflinks 8.05        
cufflinks 1.189        
cufflinks 8.905        
cufflinks 7.954        
cufflinks 8.239        
cufflinks 9.455     High  
cufflinks 4.845        
cufflinks 0.097       Low
cufflinks 6.704        
cufflinks 0.184       Low
cufflinks 0.131       Low
cufflinks 1.301        
cufflinks 9.027        
cufflinks 6.005        
cufflinks 15.54     High High
cufflinks 2.851        
cufflinks 0.451       Low
cufflinks 4.48        
cufflinks 8.746        
cufflinks 5.694        
cufflinks 6.319        
cufflinks 7.874        
cufflinks 6.365        
cufflinks 0.076     Low Low
cufflinks 5.21        
cufflinks 6.429        
cufflinks 9.214        

0 Strain