Gene : Bradi3g54267 B. distachyon v3.1
Defline:  (1 of 1) PTHR13109 - NEUROCHONDRIN Genomic Order:  6738
Name:  ? Bradi3g54267 Secondary Identifier:  ? PAC:32822855
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g54267 0.5kb upstream 0.5kb upstream 9067 true Bd3: 54533648-54542714 Brachypodium distachyon
Bradi3g54267 0.5kb upstream 0.5kb upstream 500 false Bd3: 54533648-54534147 Brachypodium distachyon
Bradi3g54267 0.5kb downstream 0.5kb downstream 9067 true Bd3: 54534148-54543214 Brachypodium distachyon
Bradi3g54267 0.5kb downstream 0.5kb downstream 500 false Bd3: 54542715-54543214 Brachypodium distachyon
Bradi3g54267 1.0kb upstream 1.0kb upstream 9567 true Bd3: 54533148-54542714 Brachypodium distachyon
Bradi3g54267 1.0kb upstream 1.0kb upstream 1000 false Bd3: 54533148-54534147 Brachypodium distachyon
Bradi3g54267 1.0kb downstream 1.0kb downstream 9567 true Bd3: 54534148-54543714 Brachypodium distachyon
Bradi3g54267 1.0kb downstream 1.0kb downstream 1000 false Bd3: 54542715-54543714 Brachypodium distachyon
Bradi3g54267 2.0kb upstream 2.0kb upstream 10567 true Bd3: 54532148-54542714 Brachypodium distachyon
Bradi3g54267 2.0kb upstream 2.0kb upstream 2000 false Bd3: 54532148-54534147 Brachypodium distachyon
Bradi3g54267 2.0kb downstream 2.0kb downstream 10567 true Bd3: 54534148-54544714 Brachypodium distachyon
Bradi3g54267 2.0kb downstream 2.0kb downstream 2000 false Bd3: 54542715-54544714 Brachypodium distachyon
Bradi3g54267 5.0kb upstream 5.0kb upstream 13567 true Bd3: 54529148-54542714 Brachypodium distachyon
Bradi3g54267 5.0kb upstream 5.0kb upstream 5000 false Bd3: 54529148-54534147 Brachypodium distachyon
Bradi3g54267 5.0kb downstream 5.0kb downstream 13567 true Bd3: 54534148-54547714 Brachypodium distachyon
Bradi3g54267 5.0kb downstream 5.0kb downstream 5000 false Bd3: 54542715-54547714 Brachypodium distachyon
Bradi3g54267 10.0kb upstream 10.0kb upstream 18567 true Bd3: 54524148-54542714 Brachypodium distachyon
Bradi3g54267 10.0kb upstream 10.0kb upstream 10000 false Bd3: 54524148-54534147 Brachypodium distachyon
Bradi3g54267 10.0kb downstream 10.0kb downstream 18567 true Bd3: 54534148-54552714 Brachypodium distachyon
Bradi3g54267 10.0kb downstream 10.0kb downstream 10000 false Bd3: 54542715-54552714 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124584444 5269 Grass View MSA
122047027 5273 Angiosperm View MSA
121345052 5274 Embryophyte View MSA
123426950 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.95        
cufflinks 1.681        
cufflinks 1.461        
cufflinks 1.536        
cufflinks 0.588       Low
cufflinks 1.451        
cufflinks 1.463        
cufflinks 1.652        
cufflinks 1.506        
cufflinks 0.724        
cufflinks 1.57        
cufflinks 1.173        
cufflinks 0.919        
cufflinks 1.02        
cufflinks 0.781        
cufflinks 1.381        
cufflinks 0.809        
cufflinks 2.137       High
cufflinks 1.11        
cufflinks 0.211       Low
cufflinks 0.927        
cufflinks 1.299        
cufflinks 1.624        
cufflinks 1.114        
cufflinks 1.384        
cufflinks 1.174        
cufflinks 1.2        
cufflinks 1.024        
cufflinks 1.072        
cufflinks 1.291        

0 Strain