Gene : Bradi3g54350 B. distachyon v3.1
Defline:  (1 of 1) PTHR13748//PTHR13748:SF43 - COBW-RELATED Genomic Order:  6749
Name:  ? Bradi3g54350 Secondary Identifier:  ? PAC:32814336
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g54350 0.5kb upstream 0.5kb upstream 6043 true Bd3: 54592903-54598945 Brachypodium distachyon
Bradi3g54350 0.5kb upstream 0.5kb upstream 500 false Bd3: 54592903-54593402 Brachypodium distachyon
Bradi3g54350 0.5kb downstream 0.5kb downstream 6043 true Bd3: 54593403-54599445 Brachypodium distachyon
Bradi3g54350 0.5kb downstream 0.5kb downstream 500 false Bd3: 54598946-54599445 Brachypodium distachyon
Bradi3g54350 1.0kb upstream 1.0kb upstream 6543 true Bd3: 54592403-54598945 Brachypodium distachyon
Bradi3g54350 1.0kb upstream 1.0kb upstream 1000 false Bd3: 54592403-54593402 Brachypodium distachyon
Bradi3g54350 1.0kb downstream 1.0kb downstream 6543 true Bd3: 54593403-54599945 Brachypodium distachyon
Bradi3g54350 1.0kb downstream 1.0kb downstream 1000 false Bd3: 54598946-54599945 Brachypodium distachyon
Bradi3g54350 2.0kb upstream 2.0kb upstream 7543 true Bd3: 54591403-54598945 Brachypodium distachyon
Bradi3g54350 2.0kb upstream 2.0kb upstream 2000 false Bd3: 54591403-54593402 Brachypodium distachyon
Bradi3g54350 2.0kb downstream 2.0kb downstream 7543 true Bd3: 54593403-54600945 Brachypodium distachyon
Bradi3g54350 2.0kb downstream 2.0kb downstream 2000 false Bd3: 54598946-54600945 Brachypodium distachyon
Bradi3g54350 5.0kb upstream 5.0kb upstream 10543 true Bd3: 54588403-54598945 Brachypodium distachyon
Bradi3g54350 5.0kb upstream 5.0kb upstream 5000 false Bd3: 54588403-54593402 Brachypodium distachyon
Bradi3g54350 5.0kb downstream 5.0kb downstream 10543 true Bd3: 54593403-54603945 Brachypodium distachyon
Bradi3g54350 5.0kb downstream 5.0kb downstream 5000 false Bd3: 54598946-54603945 Brachypodium distachyon
Bradi3g54350 10.0kb upstream 10.0kb upstream 15543 true Bd3: 54583403-54598945 Brachypodium distachyon
Bradi3g54350 10.0kb upstream 10.0kb upstream 10000 false Bd3: 54583403-54593402 Brachypodium distachyon
Bradi3g54350 10.0kb downstream 10.0kb downstream 15543 true Bd3: 54593403-54608945 Brachypodium distachyon
Bradi3g54350 10.0kb downstream 10.0kb downstream 10000 false Bd3: 54598946-54608945 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579432 5269 Grass View MSA
122047317 5273 Angiosperm View MSA
121346816 5274 Embryophyte View MSA
123428327 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.597     High  
cufflinks 42.877     High High
cufflinks 41.136     High  
cufflinks 45.578     High High
cufflinks 13.4     High  
cufflinks 28.139     High  
cufflinks 35.843     High  
cufflinks 17.842     High  
cufflinks 20.566     High  
cufflinks 28.942     High  
cufflinks 35.909     High  
cufflinks 23.747     High  
cufflinks 20.605     High  
cufflinks 26.585     High  
cufflinks 14.616     High  
cufflinks 28.189     High  
cufflinks 18.416     High  
cufflinks 4.241       Low
cufflinks 19.89     High  
cufflinks 14.575     High  
cufflinks 13.566     High  
cufflinks 26.792     High  
cufflinks 18.521     High  
cufflinks 22.434     High  
cufflinks 31.184     High  
cufflinks 43.83     High High
cufflinks 16.58     High  
cufflinks 41.585     High  
cufflinks 37.884     High  
cufflinks 16.904     High  

0 Strain