Gene : Bradi4g28680 B. distachyon v3.1
Defline:  (1 of 1) K17968 - TRIAP1/MDM35 family protein (TRIAP1, MDM35) Genomic Order:  3669
Name:  ? Bradi4g28680 Secondary Identifier:  ? PAC:32782857
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g28680 0.5kb upstream 0.5kb upstream 3295 true Bd4: 33959872-33963166 Brachypodium distachyon
Bradi4g28680 0.5kb upstream 0.5kb upstream 500 false Bd4: 33962667-33963166 Brachypodium distachyon
Bradi4g28680 0.5kb downstream 0.5kb downstream 3295 true Bd4: 33959372-33962666 Brachypodium distachyon
Bradi4g28680 0.5kb downstream 0.5kb downstream 500 false Bd4: 33959372-33959871 Brachypodium distachyon
Bradi4g28680 1.0kb upstream 1.0kb upstream 3795 true Bd4: 33959872-33963666 Brachypodium distachyon
Bradi4g28680 1.0kb upstream 1.0kb upstream 1000 false Bd4: 33962667-33963666 Brachypodium distachyon
Bradi4g28680 1.0kb downstream 1.0kb downstream 3795 true Bd4: 33958872-33962666 Brachypodium distachyon
Bradi4g28680 1.0kb downstream 1.0kb downstream 1000 false Bd4: 33958872-33959871 Brachypodium distachyon
Bradi4g28680 2.0kb upstream 2.0kb upstream 4795 true Bd4: 33959872-33964666 Brachypodium distachyon
Bradi4g28680 2.0kb upstream 2.0kb upstream 2000 false Bd4: 33962667-33964666 Brachypodium distachyon
Bradi4g28680 2.0kb downstream 2.0kb downstream 4795 true Bd4: 33957872-33962666 Brachypodium distachyon
Bradi4g28680 2.0kb downstream 2.0kb downstream 2000 false Bd4: 33957872-33959871 Brachypodium distachyon
Bradi4g28680 5.0kb upstream 5.0kb upstream 7795 true Bd4: 33959872-33967666 Brachypodium distachyon
Bradi4g28680 5.0kb upstream 5.0kb upstream 5000 false Bd4: 33962667-33967666 Brachypodium distachyon
Bradi4g28680 5.0kb downstream 5.0kb downstream 7795 true Bd4: 33954872-33962666 Brachypodium distachyon
Bradi4g28680 5.0kb downstream 5.0kb downstream 5000 false Bd4: 33954872-33959871 Brachypodium distachyon
Bradi4g28680 10.0kb upstream 10.0kb upstream 12795 true Bd4: 33959872-33972666 Brachypodium distachyon
Bradi4g28680 10.0kb upstream 10.0kb upstream 10000 false Bd4: 33962667-33972666 Brachypodium distachyon
Bradi4g28680 10.0kb downstream 10.0kb downstream 12795 true Bd4: 33949872-33962666 Brachypodium distachyon
Bradi4g28680 10.0kb downstream 10.0kb downstream 10000 false Bd4: 33949872-33959871 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124586126 5269 Grass View MSA
122043759 5273 Angiosperm View MSA
121347036 5274 Embryophyte View MSA
123380483 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.847        
cufflinks 0.579        
cufflinks 0.748        
cufflinks 0.889        
cufflinks 0.553        
cufflinks 0.544        
cufflinks 0.619        
cufflinks 0.582        
cufflinks 0.612        
cufflinks 1.423       High
cufflinks 0.579        
cufflinks 0.456       Low
cufflinks 0.438       Low
cufflinks 0.709        
cufflinks 0.793        
cufflinks 0.44       Low
cufflinks 1.461       High
cufflinks 0.656        
cufflinks 1.189        
cufflinks 1.107        
cufflinks 1.359       High
cufflinks 0.454       Low
cufflinks 0.634        
cufflinks 0.526       Low
cufflinks 0.786        
cufflinks 1.449       High
cufflinks 0.903        
cufflinks 1.231        
cufflinks 0.931        
cufflinks 0.925        

0 Strain