Gene : Bradi3g49680 B. distachyon v3.1
Defline:  (1 of 1) PTHR24031//PTHR24031:SF303 - RNA HELICASE // DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIAL Genomic Order:  6165
Name:  ? Bradi3g49680 Secondary Identifier:  ? PAC:32814868
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g49680 0.5kb upstream 0.5kb upstream 4711 true Bd3: 50721915-50726625 Brachypodium distachyon
Bradi3g49680 0.5kb upstream 0.5kb upstream 500 false Bd3: 50726126-50726625 Brachypodium distachyon
Bradi3g49680 0.5kb downstream 0.5kb downstream 4711 true Bd3: 50721415-50726125 Brachypodium distachyon
Bradi3g49680 0.5kb downstream 0.5kb downstream 500 false Bd3: 50721415-50721914 Brachypodium distachyon
Bradi3g49680 1.0kb upstream 1.0kb upstream 5211 true Bd3: 50721915-50727125 Brachypodium distachyon
Bradi3g49680 1.0kb upstream 1.0kb upstream 1000 false Bd3: 50726126-50727125 Brachypodium distachyon
Bradi3g49680 1.0kb downstream 1.0kb downstream 5211 true Bd3: 50720915-50726125 Brachypodium distachyon
Bradi3g49680 1.0kb downstream 1.0kb downstream 1000 false Bd3: 50720915-50721914 Brachypodium distachyon
Bradi3g49680 2.0kb upstream 2.0kb upstream 6211 true Bd3: 50721915-50728125 Brachypodium distachyon
Bradi3g49680 2.0kb upstream 2.0kb upstream 2000 false Bd3: 50726126-50728125 Brachypodium distachyon
Bradi3g49680 2.0kb downstream 2.0kb downstream 6211 true Bd3: 50719915-50726125 Brachypodium distachyon
Bradi3g49680 2.0kb downstream 2.0kb downstream 2000 false Bd3: 50719915-50721914 Brachypodium distachyon
Bradi3g49680 5.0kb upstream 5.0kb upstream 9211 true Bd3: 50721915-50731125 Brachypodium distachyon
Bradi3g49680 5.0kb upstream 5.0kb upstream 5000 false Bd3: 50726126-50731125 Brachypodium distachyon
Bradi3g49680 5.0kb downstream 5.0kb downstream 9211 true Bd3: 50716915-50726125 Brachypodium distachyon
Bradi3g49680 5.0kb downstream 5.0kb downstream 5000 false Bd3: 50716915-50721914 Brachypodium distachyon
Bradi3g49680 10.0kb upstream 10.0kb upstream 14211 true Bd3: 50721915-50736125 Brachypodium distachyon
Bradi3g49680 10.0kb upstream 10.0kb upstream 10000 false Bd3: 50726126-50736125 Brachypodium distachyon
Bradi3g49680 10.0kb downstream 10.0kb downstream 14211 true Bd3: 50711915-50726125 Brachypodium distachyon
Bradi3g49680 10.0kb downstream 10.0kb downstream 10000 false Bd3: 50711915-50721914 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577552 5269 Grass View MSA
122045759 5273 Angiosperm View MSA
121346907 5274 Embryophyte View MSA
123426302 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.9     High  
cufflinks 36.029     High High
cufflinks 28.928     High  
cufflinks 32.781     High High
cufflinks 11.487     High  
cufflinks 30.427     High  
cufflinks 30.362     High  
cufflinks 25.023     High  
cufflinks 26.298     High  
cufflinks 21.187     High  
cufflinks 18.871     High  
cufflinks 30.521     High  
cufflinks 17.602     High  
cufflinks 18.571     High  
cufflinks 19.475     High  
cufflinks 34.144     High High
cufflinks 18.365     High  
cufflinks 8.894       Low
cufflinks 9.792       Low
cufflinks 5.944       Low
cufflinks 15.123     High  
cufflinks 27.178     High  
cufflinks 21.882     High  
cufflinks 23.979     High  
cufflinks 25.474     High  
cufflinks 25.604     High  
cufflinks 16.077     High  
cufflinks 22.149     High  
cufflinks 24.688     High  
cufflinks 31.9     High  

0 Strain