Gene : Bradi3g49970 B. distachyon v3.1
Defline:  (1 of 2) PTHR10641//PTHR10641:SF629 - MYB-LIKE DNA-BINDING PROTEIN MYB // SUBFAMILY NOT NAMED Genomic Order:  6199
Name:  ? Bradi3g49970 Secondary Identifier:  ? PAC:32820746
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g49970 0.5kb upstream 0.5kb upstream 3596 true Bd3: 50944174-50947769 Brachypodium distachyon
Bradi3g49970 0.5kb upstream 0.5kb upstream 500 false Bd3: 50944174-50944673 Brachypodium distachyon
Bradi3g49970 0.5kb downstream 0.5kb downstream 3596 true Bd3: 50944674-50948269 Brachypodium distachyon
Bradi3g49970 0.5kb downstream 0.5kb downstream 500 false Bd3: 50947770-50948269 Brachypodium distachyon
Bradi3g49970 1.0kb upstream 1.0kb upstream 4096 true Bd3: 50943674-50947769 Brachypodium distachyon
Bradi3g49970 1.0kb upstream 1.0kb upstream 1000 false Bd3: 50943674-50944673 Brachypodium distachyon
Bradi3g49970 1.0kb downstream 1.0kb downstream 4096 true Bd3: 50944674-50948769 Brachypodium distachyon
Bradi3g49970 1.0kb downstream 1.0kb downstream 1000 false Bd3: 50947770-50948769 Brachypodium distachyon
Bradi3g49970 2.0kb upstream 2.0kb upstream 5096 true Bd3: 50942674-50947769 Brachypodium distachyon
Bradi3g49970 2.0kb upstream 2.0kb upstream 2000 false Bd3: 50942674-50944673 Brachypodium distachyon
Bradi3g49970 2.0kb downstream 2.0kb downstream 5096 true Bd3: 50944674-50949769 Brachypodium distachyon
Bradi3g49970 2.0kb downstream 2.0kb downstream 2000 false Bd3: 50947770-50949769 Brachypodium distachyon
Bradi3g49970 5.0kb upstream 5.0kb upstream 8096 true Bd3: 50939674-50947769 Brachypodium distachyon
Bradi3g49970 5.0kb upstream 5.0kb upstream 5000 false Bd3: 50939674-50944673 Brachypodium distachyon
Bradi3g49970 5.0kb downstream 5.0kb downstream 8096 true Bd3: 50944674-50952769 Brachypodium distachyon
Bradi3g49970 5.0kb downstream 5.0kb downstream 5000 false Bd3: 50947770-50952769 Brachypodium distachyon
Bradi3g49970 10.0kb upstream 10.0kb upstream 13096 true Bd3: 50934674-50947769 Brachypodium distachyon
Bradi3g49970 10.0kb upstream 10.0kb upstream 10000 false Bd3: 50934674-50944673 Brachypodium distachyon
Bradi3g49970 10.0kb downstream 10.0kb downstream 13096 true Bd3: 50944674-50957769 Brachypodium distachyon
Bradi3g49970 10.0kb downstream 10.0kb downstream 10000 false Bd3: 50947770-50957769 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579138 5269 Grass View MSA
122049039 5273 Angiosperm View MSA
121311219 5274 Embryophyte View MSA
123348543 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.282        
cufflinks 0.337        
cufflinks 0.425        
cufflinks 0.494        
cufflinks 2.533       High
cufflinks 0.207        
cufflinks 0.379        
cufflinks 0.245        
cufflinks 0.245        
cufflinks 0.234        
cufflinks 0.06     Low Low
cufflinks 0.442        
cufflinks 0.093       Low
cufflinks 0.064       Low
cufflinks 0.403        
cufflinks 0.399        
cufflinks 0.609        
cufflinks 4.464       High
cufflinks 3.157       High
cufflinks 5.062       High
cufflinks 1.419        
cufflinks 0.186        
cufflinks 0.314        
cufflinks 0.288        
cufflinks 0.529        
cufflinks 0.493        
cufflinks 0.113       Low
cufflinks 0.519        
cufflinks 0.445        
cufflinks 1.003        

0 Strain