Gene : Bradi3g50010 B. distachyon v3.1
Defline:  (1 of 2) PTHR10106//PTHR10106:SF17 - CYTOCHROME B561-RELATED // SUBFAMILY NOT NAMED Genomic Order:  6203
Name:  ? Bradi3g50010 Secondary Identifier:  ? PAC:32817330
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g50010 0.5kb upstream 0.5kb upstream 4471 true Bd3: 50972089-50976559 Brachypodium distachyon
Bradi3g50010 0.5kb upstream 0.5kb upstream 500 false Bd3: 50976060-50976559 Brachypodium distachyon
Bradi3g50010 0.5kb downstream 0.5kb downstream 4471 true Bd3: 50971589-50976059 Brachypodium distachyon
Bradi3g50010 0.5kb downstream 0.5kb downstream 500 false Bd3: 50971589-50972088 Brachypodium distachyon
Bradi3g50010 1.0kb upstream 1.0kb upstream 4971 true Bd3: 50972089-50977059 Brachypodium distachyon
Bradi3g50010 1.0kb upstream 1.0kb upstream 1000 false Bd3: 50976060-50977059 Brachypodium distachyon
Bradi3g50010 1.0kb downstream 1.0kb downstream 4971 true Bd3: 50971089-50976059 Brachypodium distachyon
Bradi3g50010 1.0kb downstream 1.0kb downstream 1000 false Bd3: 50971089-50972088 Brachypodium distachyon
Bradi3g50010 2.0kb upstream 2.0kb upstream 5971 true Bd3: 50972089-50978059 Brachypodium distachyon
Bradi3g50010 2.0kb upstream 2.0kb upstream 2000 false Bd3: 50976060-50978059 Brachypodium distachyon
Bradi3g50010 2.0kb downstream 2.0kb downstream 5971 true Bd3: 50970089-50976059 Brachypodium distachyon
Bradi3g50010 2.0kb downstream 2.0kb downstream 2000 false Bd3: 50970089-50972088 Brachypodium distachyon
Bradi3g50010 5.0kb upstream 5.0kb upstream 8971 true Bd3: 50972089-50981059 Brachypodium distachyon
Bradi3g50010 5.0kb upstream 5.0kb upstream 5000 false Bd3: 50976060-50981059 Brachypodium distachyon
Bradi3g50010 5.0kb downstream 5.0kb downstream 8971 true Bd3: 50967089-50976059 Brachypodium distachyon
Bradi3g50010 5.0kb downstream 5.0kb downstream 5000 false Bd3: 50967089-50972088 Brachypodium distachyon
Bradi3g50010 10.0kb upstream 10.0kb upstream 13971 true Bd3: 50972089-50986059 Brachypodium distachyon
Bradi3g50010 10.0kb upstream 10.0kb upstream 10000 false Bd3: 50976060-50986059 Brachypodium distachyon
Bradi3g50010 10.0kb downstream 10.0kb downstream 13971 true Bd3: 50962089-50976059 Brachypodium distachyon
Bradi3g50010 10.0kb downstream 10.0kb downstream 10000 false Bd3: 50962089-50972088 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568815 5269 Grass View MSA
122048765 5273 Angiosperm View MSA
123429174 5275 Viridiplantae View MSA
121350477 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.725        
cufflinks 5.636        
cufflinks 4.946        
cufflinks 8.516       High
cufflinks 3.864        
cufflinks 4.612        
cufflinks 4.722        
cufflinks 4.221        
cufflinks 4.888        
cufflinks 4.856        
cufflinks 8.823     High High
cufflinks 4.495        
cufflinks 7.531     High  
cufflinks 9.19     High High
cufflinks 6.151        
cufflinks 4.49        
cufflinks 5.251        
cufflinks 2.273       Low
cufflinks 3.439       Low
cufflinks 6.258        
cufflinks 5.554        
cufflinks 3.08       Low
cufflinks 5.008        
cufflinks 5.885        
cufflinks 5.771        
cufflinks 6.184        
cufflinks 8.037       High
cufflinks 4.968        
cufflinks 4.384        
cufflinks 3.344       Low

0 Strain