Gene : Bradi3g50660 B. distachyon v3.1
Defline:  (1 of 2) 2.7.2.8 - Acetylglutamate kinase Genomic Order:  6291
Name:  ? Bradi3g50660 Secondary Identifier:  ? PAC:32819525
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon ARGSYNBSUB-PWY Brachypodium distachyon pathologic  
Bdistachyon ARGSYN-PWY Brachypodium distachyon pathologic  
Bdistachyon GLUTORN-PWY Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g50660 0.5kb upstream 0.5kb upstream 2082 true Bd3: 51573175-51575256 Brachypodium distachyon
Bradi3g50660 0.5kb upstream 0.5kb upstream 500 false Bd3: 51574757-51575256 Brachypodium distachyon
Bradi3g50660 0.5kb downstream 0.5kb downstream 2082 true Bd3: 51572675-51574756 Brachypodium distachyon
Bradi3g50660 0.5kb downstream 0.5kb downstream 500 false Bd3: 51572675-51573174 Brachypodium distachyon
Bradi3g50660 1.0kb upstream 1.0kb upstream 2582 true Bd3: 51573175-51575756 Brachypodium distachyon
Bradi3g50660 1.0kb upstream 1.0kb upstream 1000 false Bd3: 51574757-51575756 Brachypodium distachyon
Bradi3g50660 1.0kb downstream 1.0kb downstream 2582 true Bd3: 51572175-51574756 Brachypodium distachyon
Bradi3g50660 1.0kb downstream 1.0kb downstream 1000 false Bd3: 51572175-51573174 Brachypodium distachyon
Bradi3g50660 2.0kb upstream 2.0kb upstream 3582 true Bd3: 51573175-51576756 Brachypodium distachyon
Bradi3g50660 2.0kb upstream 2.0kb upstream 2000 false Bd3: 51574757-51576756 Brachypodium distachyon
Bradi3g50660 2.0kb downstream 2.0kb downstream 3582 true Bd3: 51571175-51574756 Brachypodium distachyon
Bradi3g50660 2.0kb downstream 2.0kb downstream 2000 false Bd3: 51571175-51573174 Brachypodium distachyon
Bradi3g50660 5.0kb upstream 5.0kb upstream 6582 true Bd3: 51573175-51579756 Brachypodium distachyon
Bradi3g50660 5.0kb upstream 5.0kb upstream 5000 false Bd3: 51574757-51579756 Brachypodium distachyon
Bradi3g50660 5.0kb downstream 5.0kb downstream 6582 true Bd3: 51568175-51574756 Brachypodium distachyon
Bradi3g50660 5.0kb downstream 5.0kb downstream 5000 false Bd3: 51568175-51573174 Brachypodium distachyon
Bradi3g50660 10.0kb upstream 10.0kb upstream 11582 true Bd3: 51573175-51584756 Brachypodium distachyon
Bradi3g50660 10.0kb upstream 10.0kb upstream 10000 false Bd3: 51574757-51584756 Brachypodium distachyon
Bradi3g50660 10.0kb downstream 10.0kb downstream 11582 true Bd3: 51563175-51574756 Brachypodium distachyon
Bradi3g50660 10.0kb downstream 10.0kb downstream 10000 false Bd3: 51563175-51573174 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576008 5269 Grass View MSA
122045485 5273 Angiosperm View MSA
121347525 5274 Embryophyte View MSA
123424020 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.824        
cufflinks 0.521        
cufflinks 0.662        
cufflinks 0.75        
cufflinks 1.495       High
cufflinks 0.71        
cufflinks 0.874        
cufflinks 0.661        
cufflinks 0.891        
cufflinks 0.784        
cufflinks 0.299       Low
cufflinks 0.513        
cufflinks 0.386        
cufflinks 0.244       Low
cufflinks 0.92        
cufflinks 0.935        
cufflinks 1.303        
cufflinks 1.609       High
cufflinks 2.439       High
cufflinks 2.755       High
cufflinks 1.499       High
cufflinks 0.415        
cufflinks 0.703        
cufflinks 0.557        
cufflinks 0.577        
cufflinks 0.537        
cufflinks 0.316       Low
cufflinks 0.726        
cufflinks 0.855        
cufflinks 0.944        

0 Strain