Gene : Bradi3g50497 B. distachyon v3.1
Defline:  (1 of 1) PTHR31296:SF1 - UPF0565 PROTEIN C2ORF69 Genomic Order:  6271
Name:  ? Bradi3g50497 Secondary Identifier:  ? PAC:32812751
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g50497 0.5kb upstream 0.5kb upstream 3543 true Bd3: 51452168-51455710 Brachypodium distachyon
Bradi3g50497 0.5kb upstream 0.5kb upstream 500 false Bd3: 51452168-51452667 Brachypodium distachyon
Bradi3g50497 0.5kb downstream 0.5kb downstream 3543 true Bd3: 51452668-51456210 Brachypodium distachyon
Bradi3g50497 0.5kb downstream 0.5kb downstream 500 false Bd3: 51455711-51456210 Brachypodium distachyon
Bradi3g50497 1.0kb upstream 1.0kb upstream 4043 true Bd3: 51451668-51455710 Brachypodium distachyon
Bradi3g50497 1.0kb upstream 1.0kb upstream 1000 false Bd3: 51451668-51452667 Brachypodium distachyon
Bradi3g50497 1.0kb downstream 1.0kb downstream 4043 true Bd3: 51452668-51456710 Brachypodium distachyon
Bradi3g50497 1.0kb downstream 1.0kb downstream 1000 false Bd3: 51455711-51456710 Brachypodium distachyon
Bradi3g50497 2.0kb upstream 2.0kb upstream 5043 true Bd3: 51450668-51455710 Brachypodium distachyon
Bradi3g50497 2.0kb upstream 2.0kb upstream 2000 false Bd3: 51450668-51452667 Brachypodium distachyon
Bradi3g50497 2.0kb downstream 2.0kb downstream 5043 true Bd3: 51452668-51457710 Brachypodium distachyon
Bradi3g50497 2.0kb downstream 2.0kb downstream 2000 false Bd3: 51455711-51457710 Brachypodium distachyon
Bradi3g50497 5.0kb upstream 5.0kb upstream 8043 true Bd3: 51447668-51455710 Brachypodium distachyon
Bradi3g50497 5.0kb upstream 5.0kb upstream 5000 false Bd3: 51447668-51452667 Brachypodium distachyon
Bradi3g50497 5.0kb downstream 5.0kb downstream 8043 true Bd3: 51452668-51460710 Brachypodium distachyon
Bradi3g50497 5.0kb downstream 5.0kb downstream 5000 false Bd3: 51455711-51460710 Brachypodium distachyon
Bradi3g50497 10.0kb upstream 10.0kb upstream 13043 true Bd3: 51442668-51455710 Brachypodium distachyon
Bradi3g50497 10.0kb upstream 10.0kb upstream 10000 false Bd3: 51442668-51452667 Brachypodium distachyon
Bradi3g50497 10.0kb downstream 10.0kb downstream 13043 true Bd3: 51452668-51465710 Brachypodium distachyon
Bradi3g50497 10.0kb downstream 10.0kb downstream 10000 false Bd3: 51455711-51465710 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571542 5269 Grass View MSA
122048933 5273 Angiosperm View MSA
121346083 5274 Embryophyte View MSA
123425579 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.39       Low
cufflinks 1.069        
cufflinks 0.793        
cufflinks 1.172        
cufflinks 1.235        
cufflinks 0.866        
cufflinks 0.982        
cufflinks 0.933        
cufflinks 0.878        
cufflinks 0.809        
cufflinks 0.399       Low
cufflinks 0.497        
cufflinks 0.395       Low
cufflinks 0.302       Low
cufflinks 0.453       Low
cufflinks 0.72        
cufflinks 1.351        
cufflinks 1.39        
cufflinks 1.677       High
cufflinks 1.19        
cufflinks 1.582       High
cufflinks 0.645        
cufflinks 0.714        
cufflinks 0.794        
cufflinks 0.88        
cufflinks 0.961        
cufflinks 0.49        
cufflinks 0.937        
cufflinks 0.687        
cufflinks 1.406        

0 Strain