Gene : Bradi3g50820 B. distachyon v3.1
Defline:  (1 of 1) PTHR22952:SF17 - CYCLIC AMP RESPONSE ELEMENT-BINDING PROTEIN B Genomic Order:  6311
Name:  ? Bradi3g50820 Secondary Identifier:  ? PAC:32816177
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g50820 0.5kb upstream 0.5kb upstream 6085 true Bd3: 51674524-51680608 Brachypodium distachyon
Bradi3g50820 0.5kb upstream 0.5kb upstream 500 false Bd3: 51680109-51680608 Brachypodium distachyon
Bradi3g50820 0.5kb downstream 0.5kb downstream 6085 true Bd3: 51674024-51680108 Brachypodium distachyon
Bradi3g50820 0.5kb downstream 0.5kb downstream 500 false Bd3: 51674024-51674523 Brachypodium distachyon
Bradi3g50820 1.0kb upstream 1.0kb upstream 6585 true Bd3: 51674524-51681108 Brachypodium distachyon
Bradi3g50820 1.0kb upstream 1.0kb upstream 1000 false Bd3: 51680109-51681108 Brachypodium distachyon
Bradi3g50820 1.0kb downstream 1.0kb downstream 6585 true Bd3: 51673524-51680108 Brachypodium distachyon
Bradi3g50820 1.0kb downstream 1.0kb downstream 1000 false Bd3: 51673524-51674523 Brachypodium distachyon
Bradi3g50820 2.0kb upstream 2.0kb upstream 7585 true Bd3: 51674524-51682108 Brachypodium distachyon
Bradi3g50820 2.0kb upstream 2.0kb upstream 2000 false Bd3: 51680109-51682108 Brachypodium distachyon
Bradi3g50820 2.0kb downstream 2.0kb downstream 7585 true Bd3: 51672524-51680108 Brachypodium distachyon
Bradi3g50820 2.0kb downstream 2.0kb downstream 2000 false Bd3: 51672524-51674523 Brachypodium distachyon
Bradi3g50820 5.0kb upstream 5.0kb upstream 10585 true Bd3: 51674524-51685108 Brachypodium distachyon
Bradi3g50820 5.0kb upstream 5.0kb upstream 5000 false Bd3: 51680109-51685108 Brachypodium distachyon
Bradi3g50820 5.0kb downstream 5.0kb downstream 10585 true Bd3: 51669524-51680108 Brachypodium distachyon
Bradi3g50820 5.0kb downstream 5.0kb downstream 5000 false Bd3: 51669524-51674523 Brachypodium distachyon
Bradi3g50820 10.0kb upstream 10.0kb upstream 15585 true Bd3: 51674524-51690108 Brachypodium distachyon
Bradi3g50820 10.0kb upstream 10.0kb upstream 10000 false Bd3: 51680109-51690108 Brachypodium distachyon
Bradi3g50820 10.0kb downstream 10.0kb downstream 15585 true Bd3: 51664524-51680108 Brachypodium distachyon
Bradi3g50820 10.0kb downstream 10.0kb downstream 10000 false Bd3: 51664524-51674523 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026418 5273 Angiosperm View MSA
124569900 5269 Grass View MSA
121296320 5274 Embryophyte View MSA
123334502 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.028     Low  
cufflinks 0.027     Low  
cufflinks 0.026     Low  
cufflinks 0.027     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.022     Low  
cufflinks 0.024     Low  
cufflinks 0.026     Low  
cufflinks 0.005     Low Low
cufflinks 0.008     Low Low
cufflinks 0.003     Low Low
cufflinks 0.006     Low Low
cufflinks 0.005     Low Low
cufflinks 0.004     Low Low
cufflinks 0.022     Low  
cufflinks 0.02     Low  
cufflinks 0.082     Low High
cufflinks 0.074     Low High
cufflinks 0.012     Low  
cufflinks 0.038     Low  
cufflinks 0.052     Low High
cufflinks 0.011     Low  
cufflinks 0.015     Low  
cufflinks 0.008     Low Low
cufflinks 0.026     Low  
cufflinks 0.003     Low Low
cufflinks 0.018     Low  
cufflinks 0.019     Low  
cufflinks 0.047     Low High
cufflinks 0.037     Low  

0 Strain