Gene : Bradi3g50690 B. distachyon v3.1
Defline:  (1 of 2) PTHR19139//PTHR19139:SF134 - AQUAPORIN TRANSPORTER // AQUAPORIN TIP2-3-RELATED Genomic Order:  6294
Name:  ? Bradi3g50690 Secondary Identifier:  ? PAC:32821913
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g50690 0.5kb upstream 0.5kb upstream 1900 true Bd3: 51583379-51585278 Brachypodium distachyon
Bradi3g50690 0.5kb upstream 0.5kb upstream 500 false Bd3: 51584779-51585278 Brachypodium distachyon
Bradi3g50690 0.5kb downstream 0.5kb downstream 1900 true Bd3: 51582879-51584778 Brachypodium distachyon
Bradi3g50690 0.5kb downstream 0.5kb downstream 500 false Bd3: 51582879-51583378 Brachypodium distachyon
Bradi3g50690 1.0kb upstream 1.0kb upstream 2400 true Bd3: 51583379-51585778 Brachypodium distachyon
Bradi3g50690 1.0kb upstream 1.0kb upstream 1000 false Bd3: 51584779-51585778 Brachypodium distachyon
Bradi3g50690 1.0kb downstream 1.0kb downstream 2400 true Bd3: 51582379-51584778 Brachypodium distachyon
Bradi3g50690 1.0kb downstream 1.0kb downstream 1000 false Bd3: 51582379-51583378 Brachypodium distachyon
Bradi3g50690 2.0kb upstream 2.0kb upstream 3400 true Bd3: 51583379-51586778 Brachypodium distachyon
Bradi3g50690 2.0kb upstream 2.0kb upstream 2000 false Bd3: 51584779-51586778 Brachypodium distachyon
Bradi3g50690 2.0kb downstream 2.0kb downstream 3400 true Bd3: 51581379-51584778 Brachypodium distachyon
Bradi3g50690 2.0kb downstream 2.0kb downstream 2000 false Bd3: 51581379-51583378 Brachypodium distachyon
Bradi3g50690 5.0kb upstream 5.0kb upstream 6400 true Bd3: 51583379-51589778 Brachypodium distachyon
Bradi3g50690 5.0kb upstream 5.0kb upstream 5000 false Bd3: 51584779-51589778 Brachypodium distachyon
Bradi3g50690 5.0kb downstream 5.0kb downstream 6400 true Bd3: 51578379-51584778 Brachypodium distachyon
Bradi3g50690 5.0kb downstream 5.0kb downstream 5000 false Bd3: 51578379-51583378 Brachypodium distachyon
Bradi3g50690 10.0kb upstream 10.0kb upstream 11400 true Bd3: 51583379-51594778 Brachypodium distachyon
Bradi3g50690 10.0kb upstream 10.0kb upstream 10000 false Bd3: 51584779-51594778 Brachypodium distachyon
Bradi3g50690 10.0kb downstream 10.0kb downstream 11400 true Bd3: 51573379-51584778 Brachypodium distachyon
Bradi3g50690 10.0kb downstream 10.0kb downstream 10000 false Bd3: 51573379-51583378 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124584121 5269 Grass View MSA
122045007 5273 Angiosperm View MSA
121351438 5274 Embryophyte View MSA
123428679 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.764        
cufflinks 0.694        
cufflinks 1.479        
cufflinks 0.294       Low
cufflinks 5.963        
cufflinks 0.767        
cufflinks 0.757        
cufflinks 6.782        
cufflinks 1.495        
cufflinks 9.452        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.096        
cufflinks 0.157       Low
cufflinks 0.013     Low Low
cufflinks 4.213        
cufflinks 1.072        
cufflinks 2.44        
cufflinks 355.952     High High
cufflinks 12.022        
cufflinks 2.487        
cufflinks 10.666        
cufflinks 3.462        
cufflinks 3.466        
cufflinks 1.082        
cufflinks 0.512        
cufflinks 3.772        
cufflinks 0.162       Low
cufflinks 5.309        
cufflinks 5.09        
cufflinks 7.682        

0 Strain