Gene : Bradi3g50800 B. distachyon v3.1
Defline:  (1 of 1) PTHR12774 - PEROXISOMAL FARNESYLATED PROTEIN Genomic Order:  6309
Name:  ? Bradi3g50800 Secondary Identifier:  ? PAC:32818248
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g50800 0.5kb upstream 0.5kb upstream 3389 true Bd3: 51666500-51669888 Brachypodium distachyon
Bradi3g50800 0.5kb upstream 0.5kb upstream 500 false Bd3: 51669389-51669888 Brachypodium distachyon
Bradi3g50800 0.5kb downstream 0.5kb downstream 3389 true Bd3: 51666000-51669388 Brachypodium distachyon
Bradi3g50800 0.5kb downstream 0.5kb downstream 500 false Bd3: 51666000-51666499 Brachypodium distachyon
Bradi3g50800 1.0kb upstream 1.0kb upstream 3889 true Bd3: 51666500-51670388 Brachypodium distachyon
Bradi3g50800 1.0kb upstream 1.0kb upstream 1000 false Bd3: 51669389-51670388 Brachypodium distachyon
Bradi3g50800 1.0kb downstream 1.0kb downstream 3889 true Bd3: 51665500-51669388 Brachypodium distachyon
Bradi3g50800 1.0kb downstream 1.0kb downstream 1000 false Bd3: 51665500-51666499 Brachypodium distachyon
Bradi3g50800 2.0kb upstream 2.0kb upstream 4889 true Bd3: 51666500-51671388 Brachypodium distachyon
Bradi3g50800 2.0kb upstream 2.0kb upstream 2000 false Bd3: 51669389-51671388 Brachypodium distachyon
Bradi3g50800 2.0kb downstream 2.0kb downstream 4889 true Bd3: 51664500-51669388 Brachypodium distachyon
Bradi3g50800 2.0kb downstream 2.0kb downstream 2000 false Bd3: 51664500-51666499 Brachypodium distachyon
Bradi3g50800 5.0kb upstream 5.0kb upstream 7889 true Bd3: 51666500-51674388 Brachypodium distachyon
Bradi3g50800 5.0kb upstream 5.0kb upstream 5000 false Bd3: 51669389-51674388 Brachypodium distachyon
Bradi3g50800 5.0kb downstream 5.0kb downstream 7889 true Bd3: 51661500-51669388 Brachypodium distachyon
Bradi3g50800 5.0kb downstream 5.0kb downstream 5000 false Bd3: 51661500-51666499 Brachypodium distachyon
Bradi3g50800 10.0kb upstream 10.0kb upstream 12889 true Bd3: 51666500-51679388 Brachypodium distachyon
Bradi3g50800 10.0kb upstream 10.0kb upstream 10000 false Bd3: 51669389-51679388 Brachypodium distachyon
Bradi3g50800 10.0kb downstream 10.0kb downstream 12889 true Bd3: 51656500-51669388 Brachypodium distachyon
Bradi3g50800 10.0kb downstream 10.0kb downstream 10000 false Bd3: 51656500-51666499 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575947 5269 Grass View MSA
122041599 5273 Angiosperm View MSA
121347207 5274 Embryophyte View MSA
123425980 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.834        
cufflinks 9.922        
cufflinks 14.446     High High
cufflinks 12.229     High  
cufflinks 7.135        
cufflinks 7.17        
cufflinks 9.164        
cufflinks 5.019       Low
cufflinks 5.723       Low
cufflinks 17.91     High High
cufflinks 9.133     High  
cufflinks 6.525        
cufflinks 7.263     High  
cufflinks 7.793     High  
cufflinks 7.298        
cufflinks 8.545        
cufflinks 9.876        
cufflinks 6.125       Low
cufflinks 11.822        
cufflinks 15.926     High High
cufflinks 10.956        
cufflinks 10.518     High  
cufflinks 4.788       Low
cufflinks 5.989       Low
cufflinks 8.715        
cufflinks 21.733     High High
cufflinks 7.524        
cufflinks 20.613     High High
cufflinks 14.015     High  
cufflinks 9.414        

0 Strain