Gene : Bradi3g51077 B. distachyon v3.1
Defline:  (1 of 3) PTHR22891//PTHR22891:SF34 - EUKARYOTIC TRANSLATION INITIATION FACTOR 2C Genomic Order:  6342
Name:  ? Bradi3g51077 Secondary Identifier:  ? PAC:32819366
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g51077 0.5kb upstream 0.5kb upstream 12456 true Bd3: 51944162-51956617 Brachypodium distachyon
Bradi3g51077 0.5kb upstream 0.5kb upstream 500 false Bd3: 51944162-51944661 Brachypodium distachyon
Bradi3g51077 0.5kb downstream 0.5kb downstream 12456 true Bd3: 51944662-51957117 Brachypodium distachyon
Bradi3g51077 0.5kb downstream 0.5kb downstream 500 false Bd3: 51956618-51957117 Brachypodium distachyon
Bradi3g51077 1.0kb upstream 1.0kb upstream 12956 true Bd3: 51943662-51956617 Brachypodium distachyon
Bradi3g51077 1.0kb upstream 1.0kb upstream 1000 false Bd3: 51943662-51944661 Brachypodium distachyon
Bradi3g51077 1.0kb downstream 1.0kb downstream 12956 true Bd3: 51944662-51957617 Brachypodium distachyon
Bradi3g51077 1.0kb downstream 1.0kb downstream 1000 false Bd3: 51956618-51957617 Brachypodium distachyon
Bradi3g51077 2.0kb upstream 2.0kb upstream 13956 true Bd3: 51942662-51956617 Brachypodium distachyon
Bradi3g51077 2.0kb upstream 2.0kb upstream 2000 false Bd3: 51942662-51944661 Brachypodium distachyon
Bradi3g51077 2.0kb downstream 2.0kb downstream 13956 true Bd3: 51944662-51958617 Brachypodium distachyon
Bradi3g51077 2.0kb downstream 2.0kb downstream 2000 false Bd3: 51956618-51958617 Brachypodium distachyon
Bradi3g51077 5.0kb upstream 5.0kb upstream 16956 true Bd3: 51939662-51956617 Brachypodium distachyon
Bradi3g51077 5.0kb upstream 5.0kb upstream 5000 false Bd3: 51939662-51944661 Brachypodium distachyon
Bradi3g51077 5.0kb downstream 5.0kb downstream 16956 true Bd3: 51944662-51961617 Brachypodium distachyon
Bradi3g51077 5.0kb downstream 5.0kb downstream 5000 false Bd3: 51956618-51961617 Brachypodium distachyon
Bradi3g51077 10.0kb upstream 10.0kb upstream 21956 true Bd3: 51934662-51956617 Brachypodium distachyon
Bradi3g51077 10.0kb upstream 10.0kb upstream 10000 false Bd3: 51934662-51944661 Brachypodium distachyon
Bradi3g51077 10.0kb downstream 10.0kb downstream 21956 true Bd3: 51944662-51966617 Brachypodium distachyon
Bradi3g51077 10.0kb downstream 10.0kb downstream 10000 false Bd3: 51956618-51966617 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124567934 5269 Grass View MSA
122045279 5273 Angiosperm View MSA
121345149 5274 Embryophyte View MSA
123428465 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.181        
cufflinks 0.662        
cufflinks 0.566        
cufflinks 0.433        
cufflinks 0.109       Low
cufflinks 0.546        
cufflinks 0.543        
cufflinks 0.435        
cufflinks 0.583        
cufflinks 0.342        
cufflinks 0.279        
cufflinks 0.45        
cufflinks 0.282        
cufflinks 0.191        
cufflinks 0.165        
cufflinks 0.512        
cufflinks 0.15     Low  
cufflinks 11.099       High
cufflinks 0.157     Low  
cufflinks 0.047     Low Low
cufflinks 0.651        
cufflinks 0.52        
cufflinks 0.357        
cufflinks 0.36        
cufflinks 0.446        
cufflinks 0.416        
cufflinks 0.244        
cufflinks 0.483        
cufflinks 0.512        
cufflinks 0.672        

0 Strain