Gene : Bradi3g51310 B. distachyon v3.1
Defline:  (1 of 1) PTHR13675:SF0 - LYR MOTIF-CONTAINING PROTEIN 2 Genomic Order:  6371
Name:  ? Bradi3g51310 Secondary Identifier:  ? PAC:32812701
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g51310 0.5kb upstream 0.5kb upstream 2718 true Bd3: 52142026-52144743 Brachypodium distachyon
Bradi3g51310 0.5kb upstream 0.5kb upstream 500 false Bd3: 52142026-52142525 Brachypodium distachyon
Bradi3g51310 0.5kb downstream 0.5kb downstream 2718 true Bd3: 52142526-52145243 Brachypodium distachyon
Bradi3g51310 0.5kb downstream 0.5kb downstream 500 false Bd3: 52144744-52145243 Brachypodium distachyon
Bradi3g51310 1.0kb upstream 1.0kb upstream 3218 true Bd3: 52141526-52144743 Brachypodium distachyon
Bradi3g51310 1.0kb upstream 1.0kb upstream 1000 false Bd3: 52141526-52142525 Brachypodium distachyon
Bradi3g51310 1.0kb downstream 1.0kb downstream 3218 true Bd3: 52142526-52145743 Brachypodium distachyon
Bradi3g51310 1.0kb downstream 1.0kb downstream 1000 false Bd3: 52144744-52145743 Brachypodium distachyon
Bradi3g51310 2.0kb upstream 2.0kb upstream 4218 true Bd3: 52140526-52144743 Brachypodium distachyon
Bradi3g51310 2.0kb upstream 2.0kb upstream 2000 false Bd3: 52140526-52142525 Brachypodium distachyon
Bradi3g51310 2.0kb downstream 2.0kb downstream 4218 true Bd3: 52142526-52146743 Brachypodium distachyon
Bradi3g51310 2.0kb downstream 2.0kb downstream 2000 false Bd3: 52144744-52146743 Brachypodium distachyon
Bradi3g51310 5.0kb upstream 5.0kb upstream 7218 true Bd3: 52137526-52144743 Brachypodium distachyon
Bradi3g51310 5.0kb upstream 5.0kb upstream 5000 false Bd3: 52137526-52142525 Brachypodium distachyon
Bradi3g51310 5.0kb downstream 5.0kb downstream 7218 true Bd3: 52142526-52149743 Brachypodium distachyon
Bradi3g51310 5.0kb downstream 5.0kb downstream 5000 false Bd3: 52144744-52149743 Brachypodium distachyon
Bradi3g51310 10.0kb upstream 10.0kb upstream 12218 true Bd3: 52132526-52144743 Brachypodium distachyon
Bradi3g51310 10.0kb upstream 10.0kb upstream 10000 false Bd3: 52132526-52142525 Brachypodium distachyon
Bradi3g51310 10.0kb downstream 10.0kb downstream 12218 true Bd3: 52142526-52154743 Brachypodium distachyon
Bradi3g51310 10.0kb downstream 10.0kb downstream 10000 false Bd3: 52144744-52154743 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028538 5273 Angiosperm View MSA
124578184 5269 Grass View MSA
121346183 5274 Embryophyte View MSA
123425474 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.757        
cufflinks 2.567        
cufflinks 2.133        
cufflinks 1.978        
cufflinks 0.925        
cufflinks 2.018        
cufflinks 2.155        
cufflinks 1.722        
cufflinks 2.206        
cufflinks 1.731        
cufflinks 0.615       Low
cufflinks 2.085        
cufflinks 0.702       Low
cufflinks 0.73       Low
cufflinks 1.023        
cufflinks 2.088        
cufflinks 2.55        
cufflinks 2.991       High
cufflinks 1.827        
cufflinks 0.217       Low
cufflinks 3.429       High
cufflinks 2.104        
cufflinks 2.072        
cufflinks 2.058        
cufflinks 2.053        
cufflinks 2.174        
cufflinks 0.39       Low
cufflinks 1.566        
cufflinks 1.736        
cufflinks 3.854       High

0 Strain