Gene : Bradi3g51320 B. distachyon v3.1
Defline:  (1 of 2) PF00872//PF03101//PF04434 - Transposase, Mutator family (Transposase_mut) // FAR1 DNA-binding domain (FAR1) // SWIM zinc finger (SWIM) Genomic Order:  6373
Name:  ? Bradi3g51320 Secondary Identifier:  ? PAC:32818944
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g51320 0.5kb upstream 0.5kb upstream 2678 true Bd3: 52149127-52151804 Brachypodium distachyon
Bradi3g51320 0.5kb upstream 0.5kb upstream 500 false Bd3: 52151305-52151804 Brachypodium distachyon
Bradi3g51320 0.5kb downstream 0.5kb downstream 2678 true Bd3: 52148627-52151304 Brachypodium distachyon
Bradi3g51320 0.5kb downstream 0.5kb downstream 500 false Bd3: 52148627-52149126 Brachypodium distachyon
Bradi3g51320 1.0kb upstream 1.0kb upstream 3178 true Bd3: 52149127-52152304 Brachypodium distachyon
Bradi3g51320 1.0kb upstream 1.0kb upstream 1000 false Bd3: 52151305-52152304 Brachypodium distachyon
Bradi3g51320 1.0kb downstream 1.0kb downstream 3178 true Bd3: 52148127-52151304 Brachypodium distachyon
Bradi3g51320 1.0kb downstream 1.0kb downstream 1000 false Bd3: 52148127-52149126 Brachypodium distachyon
Bradi3g51320 2.0kb upstream 2.0kb upstream 4178 true Bd3: 52149127-52153304 Brachypodium distachyon
Bradi3g51320 2.0kb upstream 2.0kb upstream 2000 false Bd3: 52151305-52153304 Brachypodium distachyon
Bradi3g51320 2.0kb downstream 2.0kb downstream 4178 true Bd3: 52147127-52151304 Brachypodium distachyon
Bradi3g51320 2.0kb downstream 2.0kb downstream 2000 false Bd3: 52147127-52149126 Brachypodium distachyon
Bradi3g51320 5.0kb upstream 5.0kb upstream 7178 true Bd3: 52149127-52156304 Brachypodium distachyon
Bradi3g51320 5.0kb upstream 5.0kb upstream 5000 false Bd3: 52151305-52156304 Brachypodium distachyon
Bradi3g51320 5.0kb downstream 5.0kb downstream 7178 true Bd3: 52144127-52151304 Brachypodium distachyon
Bradi3g51320 5.0kb downstream 5.0kb downstream 5000 false Bd3: 52144127-52149126 Brachypodium distachyon
Bradi3g51320 10.0kb upstream 10.0kb upstream 12178 true Bd3: 52149127-52161304 Brachypodium distachyon
Bradi3g51320 10.0kb upstream 10.0kb upstream 10000 false Bd3: 52151305-52161304 Brachypodium distachyon
Bradi3g51320 10.0kb downstream 10.0kb downstream 12178 true Bd3: 52139127-52151304 Brachypodium distachyon
Bradi3g51320 10.0kb downstream 10.0kb downstream 10000 false Bd3: 52139127-52149126 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124585095 5269 Grass View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.031     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain