Gene : Bradi3g51340 B. distachyon v3.1
Defline:  (1 of 1) PTHR13505:SF7 - TRANSMEMBRANE PROTEIN 208 Genomic Order:  6375
Name:  ? Bradi3g51340 Secondary Identifier:  ? PAC:32812471
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g51340 0.5kb upstream 0.5kb upstream 3970 true Bd3: 52153738-52157707 Brachypodium distachyon
Bradi3g51340 0.5kb upstream 0.5kb upstream 500 false Bd3: 52153738-52154237 Brachypodium distachyon
Bradi3g51340 0.5kb downstream 0.5kb downstream 3970 true Bd3: 52154238-52158207 Brachypodium distachyon
Bradi3g51340 0.5kb downstream 0.5kb downstream 500 false Bd3: 52157708-52158207 Brachypodium distachyon
Bradi3g51340 1.0kb upstream 1.0kb upstream 4470 true Bd3: 52153238-52157707 Brachypodium distachyon
Bradi3g51340 1.0kb upstream 1.0kb upstream 1000 false Bd3: 52153238-52154237 Brachypodium distachyon
Bradi3g51340 1.0kb downstream 1.0kb downstream 4470 true Bd3: 52154238-52158707 Brachypodium distachyon
Bradi3g51340 1.0kb downstream 1.0kb downstream 1000 false Bd3: 52157708-52158707 Brachypodium distachyon
Bradi3g51340 2.0kb upstream 2.0kb upstream 5470 true Bd3: 52152238-52157707 Brachypodium distachyon
Bradi3g51340 2.0kb upstream 2.0kb upstream 2000 false Bd3: 52152238-52154237 Brachypodium distachyon
Bradi3g51340 2.0kb downstream 2.0kb downstream 5470 true Bd3: 52154238-52159707 Brachypodium distachyon
Bradi3g51340 2.0kb downstream 2.0kb downstream 2000 false Bd3: 52157708-52159707 Brachypodium distachyon
Bradi3g51340 5.0kb upstream 5.0kb upstream 8470 true Bd3: 52149238-52157707 Brachypodium distachyon
Bradi3g51340 5.0kb upstream 5.0kb upstream 5000 false Bd3: 52149238-52154237 Brachypodium distachyon
Bradi3g51340 5.0kb downstream 5.0kb downstream 8470 true Bd3: 52154238-52162707 Brachypodium distachyon
Bradi3g51340 5.0kb downstream 5.0kb downstream 5000 false Bd3: 52157708-52162707 Brachypodium distachyon
Bradi3g51340 10.0kb upstream 10.0kb upstream 13470 true Bd3: 52144238-52157707 Brachypodium distachyon
Bradi3g51340 10.0kb upstream 10.0kb upstream 10000 false Bd3: 52144238-52154237 Brachypodium distachyon
Bradi3g51340 10.0kb downstream 10.0kb downstream 13470 true Bd3: 52154238-52167707 Brachypodium distachyon
Bradi3g51340 10.0kb downstream 10.0kb downstream 10000 false Bd3: 52157708-52167707 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576898 5269 Grass View MSA
122042916 5273 Angiosperm View MSA
121345571 5274 Embryophyte View MSA
123425325 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.934     High  
cufflinks 18.49     High  
cufflinks 20.043     High  
cufflinks 27.567     High  
cufflinks 17.075     High  
cufflinks 16.18     High  
cufflinks 15.659     High  
cufflinks 14.942     High Low
cufflinks 17.031     High  
cufflinks 26.424     High  
cufflinks 13.703     High Low
cufflinks 17.944     High  
cufflinks 12.231     High Low
cufflinks 14.532     High Low
cufflinks 20.222     High  
cufflinks 16.278     High  
cufflinks 26.895     High  
cufflinks 21.829     High  
cufflinks 26.201     High  
cufflinks 20.034     High  
cufflinks 34.662     High High
cufflinks 15.063     High Low
cufflinks 15.129     High  
cufflinks 17.344     High  
cufflinks 20.128     High  
cufflinks 33.486     High High
cufflinks 15.555     High  
cufflinks 23.622     High  
cufflinks 19.129     High  
cufflinks 31.108     High High

0 Strain