Gene : Bradi3g51250 B. distachyon v3.1
Defline:  (1 of 8) PF00924 - Mechanosensitive ion channel (MS_channel) Genomic Order:  6364
Name:  ? Bradi3g51250 Secondary Identifier:  ? PAC:32813422
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g51250 0.5kb upstream 0.5kb upstream 5180 true Bd3: 52105254-52110433 Brachypodium distachyon
Bradi3g51250 0.5kb upstream 0.5kb upstream 500 false Bd3: 52109934-52110433 Brachypodium distachyon
Bradi3g51250 0.5kb downstream 0.5kb downstream 5180 true Bd3: 52104754-52109933 Brachypodium distachyon
Bradi3g51250 0.5kb downstream 0.5kb downstream 500 false Bd3: 52104754-52105253 Brachypodium distachyon
Bradi3g51250 1.0kb upstream 1.0kb upstream 5680 true Bd3: 52105254-52110933 Brachypodium distachyon
Bradi3g51250 1.0kb upstream 1.0kb upstream 1000 false Bd3: 52109934-52110933 Brachypodium distachyon
Bradi3g51250 1.0kb downstream 1.0kb downstream 5680 true Bd3: 52104254-52109933 Brachypodium distachyon
Bradi3g51250 1.0kb downstream 1.0kb downstream 1000 false Bd3: 52104254-52105253 Brachypodium distachyon
Bradi3g51250 2.0kb upstream 2.0kb upstream 6680 true Bd3: 52105254-52111933 Brachypodium distachyon
Bradi3g51250 2.0kb upstream 2.0kb upstream 2000 false Bd3: 52109934-52111933 Brachypodium distachyon
Bradi3g51250 2.0kb downstream 2.0kb downstream 6680 true Bd3: 52103254-52109933 Brachypodium distachyon
Bradi3g51250 2.0kb downstream 2.0kb downstream 2000 false Bd3: 52103254-52105253 Brachypodium distachyon
Bradi3g51250 5.0kb upstream 5.0kb upstream 9680 true Bd3: 52105254-52114933 Brachypodium distachyon
Bradi3g51250 5.0kb upstream 5.0kb upstream 5000 false Bd3: 52109934-52114933 Brachypodium distachyon
Bradi3g51250 5.0kb downstream 5.0kb downstream 9680 true Bd3: 52100254-52109933 Brachypodium distachyon
Bradi3g51250 5.0kb downstream 5.0kb downstream 5000 false Bd3: 52100254-52105253 Brachypodium distachyon
Bradi3g51250 10.0kb upstream 10.0kb upstream 14680 true Bd3: 52105254-52119933 Brachypodium distachyon
Bradi3g51250 10.0kb upstream 10.0kb upstream 10000 false Bd3: 52109934-52119933 Brachypodium distachyon
Bradi3g51250 10.0kb downstream 10.0kb downstream 14680 true Bd3: 52095254-52109933 Brachypodium distachyon
Bradi3g51250 10.0kb downstream 10.0kb downstream 10000 false Bd3: 52095254-52105253 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578867 5269 Grass View MSA
122045304 5273 Angiosperm View MSA
121348130 5274 Embryophyte View MSA
123428857 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.584     High High
cufflinks 5.839        
cufflinks 5.295        
cufflinks 6.987        
cufflinks 32.728     High High
cufflinks 6.436        
cufflinks 5.907        
cufflinks 16.489     High  
cufflinks 7.757        
cufflinks 3.502       Low
cufflinks 10.471     High  
cufflinks 7.323        
cufflinks 8.952     High  
cufflinks 9.843     High  
cufflinks 34.799     High High
cufflinks 5.446        
cufflinks 5.069        
cufflinks 3.713       Low
cufflinks 43.735     High High
cufflinks 28.328     High High
cufflinks 11.043        
cufflinks 4.999        
cufflinks 19.397     High  
cufflinks 7.718        
cufflinks 6.145        
cufflinks 5.038        
cufflinks 8.758        
cufflinks 4.755        
cufflinks 4.449        
cufflinks 9.52        

0 Strain