Gene : Bradi3g51437 B. distachyon v3.1
Defline:  (1 of 1) PTHR12829:SF2 - N6-ADENOSINE-METHYLTRANSFERASE 70 KDA SUBUNIT Genomic Order:  6390
Name:  ? Bradi3g51437 Secondary Identifier:  ? PAC:32815489
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g51437 0.5kb upstream 0.5kb upstream 5310 true Bd3: 52248840-52254149 Brachypodium distachyon
Bradi3g51437 0.5kb upstream 0.5kb upstream 500 false Bd3: 52248840-52249339 Brachypodium distachyon
Bradi3g51437 0.5kb downstream 0.5kb downstream 5310 true Bd3: 52249340-52254649 Brachypodium distachyon
Bradi3g51437 0.5kb downstream 0.5kb downstream 500 false Bd3: 52254150-52254649 Brachypodium distachyon
Bradi3g51437 1.0kb upstream 1.0kb upstream 5810 true Bd3: 52248340-52254149 Brachypodium distachyon
Bradi3g51437 1.0kb upstream 1.0kb upstream 1000 false Bd3: 52248340-52249339 Brachypodium distachyon
Bradi3g51437 1.0kb downstream 1.0kb downstream 5810 true Bd3: 52249340-52255149 Brachypodium distachyon
Bradi3g51437 1.0kb downstream 1.0kb downstream 1000 false Bd3: 52254150-52255149 Brachypodium distachyon
Bradi3g51437 2.0kb upstream 2.0kb upstream 6810 true Bd3: 52247340-52254149 Brachypodium distachyon
Bradi3g51437 2.0kb upstream 2.0kb upstream 2000 false Bd3: 52247340-52249339 Brachypodium distachyon
Bradi3g51437 2.0kb downstream 2.0kb downstream 6810 true Bd3: 52249340-52256149 Brachypodium distachyon
Bradi3g51437 2.0kb downstream 2.0kb downstream 2000 false Bd3: 52254150-52256149 Brachypodium distachyon
Bradi3g51437 5.0kb upstream 5.0kb upstream 9810 true Bd3: 52244340-52254149 Brachypodium distachyon
Bradi3g51437 5.0kb upstream 5.0kb upstream 5000 false Bd3: 52244340-52249339 Brachypodium distachyon
Bradi3g51437 5.0kb downstream 5.0kb downstream 9810 true Bd3: 52249340-52259149 Brachypodium distachyon
Bradi3g51437 5.0kb downstream 5.0kb downstream 5000 false Bd3: 52254150-52259149 Brachypodium distachyon
Bradi3g51437 10.0kb upstream 10.0kb upstream 14810 true Bd3: 52239340-52254149 Brachypodium distachyon
Bradi3g51437 10.0kb upstream 10.0kb upstream 10000 false Bd3: 52239340-52249339 Brachypodium distachyon
Bradi3g51437 10.0kb downstream 10.0kb downstream 14810 true Bd3: 52249340-52264149 Brachypodium distachyon
Bradi3g51437 10.0kb downstream 10.0kb downstream 10000 false Bd3: 52254150-52264149 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575115 5269 Grass View MSA
122047646 5273 Angiosperm View MSA
121344121 5274 Embryophyte View MSA
123426132 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.222       Low
cufflinks 2.406        
cufflinks 2.352        
cufflinks 2.066        
cufflinks 1.162       Low
cufflinks 1.918        
cufflinks 2.087        
cufflinks 1.634        
cufflinks 1.967        
cufflinks 1.522        
cufflinks 1.563        
cufflinks 1.88        
cufflinks 1.084       Low
cufflinks 1.192       Low
cufflinks 1.046       Low
cufflinks 2.118        
cufflinks 1.621        
cufflinks 3.297       High
cufflinks 2.004        
cufflinks 1.178       Low
cufflinks 2.446        
cufflinks 2.134        
cufflinks 1.769        
cufflinks 1.731        
cufflinks 1.68        
cufflinks 2.218        
cufflinks 1.319        
cufflinks 2.049        
cufflinks 2.027        
cufflinks 2.268        

0 Strain