Gene : Bradi4g29740 B. distachyon v3.1
Defline:  (1 of 1) PTHR28620:SF1 - PROTEIN F25B4.8, ISOFORM A Genomic Order:  3821
Name:  ? Bradi4g29740 Secondary Identifier:  ? PAC:32790401
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g29740 0.5kb upstream 0.5kb upstream 3782 true Bd4: 35244853-35248634 Brachypodium distachyon
Bradi4g29740 0.5kb upstream 0.5kb upstream 500 false Bd4: 35248135-35248634 Brachypodium distachyon
Bradi4g29740 0.5kb downstream 0.5kb downstream 3782 true Bd4: 35244353-35248134 Brachypodium distachyon
Bradi4g29740 0.5kb downstream 0.5kb downstream 500 false Bd4: 35244353-35244852 Brachypodium distachyon
Bradi4g29740 1.0kb upstream 1.0kb upstream 4282 true Bd4: 35244853-35249134 Brachypodium distachyon
Bradi4g29740 1.0kb upstream 1.0kb upstream 1000 false Bd4: 35248135-35249134 Brachypodium distachyon
Bradi4g29740 1.0kb downstream 1.0kb downstream 4282 true Bd4: 35243853-35248134 Brachypodium distachyon
Bradi4g29740 1.0kb downstream 1.0kb downstream 1000 false Bd4: 35243853-35244852 Brachypodium distachyon
Bradi4g29740 2.0kb upstream 2.0kb upstream 5282 true Bd4: 35244853-35250134 Brachypodium distachyon
Bradi4g29740 2.0kb upstream 2.0kb upstream 2000 false Bd4: 35248135-35250134 Brachypodium distachyon
Bradi4g29740 2.0kb downstream 2.0kb downstream 5282 true Bd4: 35242853-35248134 Brachypodium distachyon
Bradi4g29740 2.0kb downstream 2.0kb downstream 2000 false Bd4: 35242853-35244852 Brachypodium distachyon
Bradi4g29740 5.0kb upstream 5.0kb upstream 8282 true Bd4: 35244853-35253134 Brachypodium distachyon
Bradi4g29740 5.0kb upstream 5.0kb upstream 5000 false Bd4: 35248135-35253134 Brachypodium distachyon
Bradi4g29740 5.0kb downstream 5.0kb downstream 8282 true Bd4: 35239853-35248134 Brachypodium distachyon
Bradi4g29740 5.0kb downstream 5.0kb downstream 5000 false Bd4: 35239853-35244852 Brachypodium distachyon
Bradi4g29740 10.0kb upstream 10.0kb upstream 13282 true Bd4: 35244853-35258134 Brachypodium distachyon
Bradi4g29740 10.0kb upstream 10.0kb upstream 10000 false Bd4: 35248135-35258134 Brachypodium distachyon
Bradi4g29740 10.0kb downstream 10.0kb downstream 13282 true Bd4: 35234853-35248134 Brachypodium distachyon
Bradi4g29740 10.0kb downstream 10.0kb downstream 10000 false Bd4: 35234853-35244852 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124589960 5269 Grass View MSA
122046805 5273 Angiosperm View MSA
121351715 5274 Embryophyte View MSA
123426563 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.792       Low
cufflinks 2.875        
cufflinks 3.142        
cufflinks 4.502        
cufflinks 4.671        
cufflinks 2.586        
cufflinks 3.066        
cufflinks 2.027       Low
cufflinks 2.666        
cufflinks 9.297       High
cufflinks 4.983        
cufflinks 1.742       Low
cufflinks 3.399        
cufflinks 3.848        
cufflinks 2.598        
cufflinks 2.162        
cufflinks 4.439        
cufflinks 2.427        
cufflinks 8.879       High
cufflinks 29.56     High High
cufflinks 3.991        
cufflinks 2.979        
cufflinks 2.217        
cufflinks 2.449        
cufflinks 3.668        
cufflinks 5.109        
cufflinks 3.267        
cufflinks 6.962        
cufflinks 5.706        
cufflinks 2.001       Low

0 Strain