Gene : Bradi3g57087 B. distachyon v3.1
Defline:  (1 of 1) PTHR13710:SF81 - ATP-DEPENDENT DNA HELICASE Q-LIKE 3 Genomic Order:  7093
Name:  ? Bradi3g57087 Secondary Identifier:  ? PAC:32816568
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g57087 0.5kb upstream 0.5kb upstream 7848 true Bd3: 56504871-56512718 Brachypodium distachyon
Bradi3g57087 0.5kb upstream 0.5kb upstream 500 false Bd3: 56504871-56505370 Brachypodium distachyon
Bradi3g57087 0.5kb downstream 0.5kb downstream 7848 true Bd3: 56505371-56513218 Brachypodium distachyon
Bradi3g57087 0.5kb downstream 0.5kb downstream 500 false Bd3: 56512719-56513218 Brachypodium distachyon
Bradi3g57087 1.0kb upstream 1.0kb upstream 8348 true Bd3: 56504371-56512718 Brachypodium distachyon
Bradi3g57087 1.0kb upstream 1.0kb upstream 1000 false Bd3: 56504371-56505370 Brachypodium distachyon
Bradi3g57087 1.0kb downstream 1.0kb downstream 8348 true Bd3: 56505371-56513718 Brachypodium distachyon
Bradi3g57087 1.0kb downstream 1.0kb downstream 1000 false Bd3: 56512719-56513718 Brachypodium distachyon
Bradi3g57087 2.0kb upstream 2.0kb upstream 9348 true Bd3: 56503371-56512718 Brachypodium distachyon
Bradi3g57087 2.0kb upstream 2.0kb upstream 2000 false Bd3: 56503371-56505370 Brachypodium distachyon
Bradi3g57087 2.0kb downstream 2.0kb downstream 9348 true Bd3: 56505371-56514718 Brachypodium distachyon
Bradi3g57087 2.0kb downstream 2.0kb downstream 2000 false Bd3: 56512719-56514718 Brachypodium distachyon
Bradi3g57087 5.0kb upstream 5.0kb upstream 12348 true Bd3: 56500371-56512718 Brachypodium distachyon
Bradi3g57087 5.0kb upstream 5.0kb upstream 5000 false Bd3: 56500371-56505370 Brachypodium distachyon
Bradi3g57087 5.0kb downstream 5.0kb downstream 12348 true Bd3: 56505371-56517718 Brachypodium distachyon
Bradi3g57087 5.0kb downstream 5.0kb downstream 5000 false Bd3: 56512719-56517718 Brachypodium distachyon
Bradi3g57087 10.0kb upstream 10.0kb upstream 17348 true Bd3: 56495371-56512718 Brachypodium distachyon
Bradi3g57087 10.0kb upstream 10.0kb upstream 10000 false Bd3: 56495371-56505370 Brachypodium distachyon
Bradi3g57087 10.0kb downstream 10.0kb downstream 17348 true Bd3: 56505371-56522718 Brachypodium distachyon
Bradi3g57087 10.0kb downstream 10.0kb downstream 10000 false Bd3: 56512719-56522718 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026250 5273 Angiosperm View MSA
124580881 5269 Grass View MSA
121296244 5274 Embryophyte View MSA
123427743 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.382       Low
cufflinks 0.951       High
cufflinks 0.755        
cufflinks 0.853        
cufflinks 0.547        
cufflinks 0.821        
cufflinks 0.685        
cufflinks 0.743        
cufflinks 0.878       High
cufflinks 0.666        
cufflinks 0.434        
cufflinks 0.642        
cufflinks 0.495        
cufflinks 0.395       Low
cufflinks 0.453        
cufflinks 0.696        
cufflinks 0.341       Low
cufflinks 0.847        
cufflinks 0.528        
cufflinks 0.47        
cufflinks 0.54        
cufflinks 0.995       High
cufflinks 0.846        
cufflinks 0.87        
cufflinks 0.791        
cufflinks 0.705        
cufflinks 0.382       Low
cufflinks 0.762        
cufflinks 0.872        
cufflinks 0.715        

0 Strain