Gene : Bradi3g57630 B. distachyon v3.1
Defline:  (1 of 3) KOG1572 - Predicted protein tyrosine phosphatase Genomic Order:  7163
Name:  ? Bradi3g57630 Secondary Identifier:  ? PAC:32818784
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g57630 0.5kb upstream 0.5kb upstream 1973 true Bd3: 57095789-57097761 Brachypodium distachyon
Bradi3g57630 0.5kb upstream 0.5kb upstream 500 false Bd3: 57095789-57096288 Brachypodium distachyon
Bradi3g57630 0.5kb downstream 0.5kb downstream 1973 true Bd3: 57096289-57098261 Brachypodium distachyon
Bradi3g57630 0.5kb downstream 0.5kb downstream 500 false Bd3: 57097762-57098261 Brachypodium distachyon
Bradi3g57630 1.0kb upstream 1.0kb upstream 2473 true Bd3: 57095289-57097761 Brachypodium distachyon
Bradi3g57630 1.0kb upstream 1.0kb upstream 1000 false Bd3: 57095289-57096288 Brachypodium distachyon
Bradi3g57630 1.0kb downstream 1.0kb downstream 2473 true Bd3: 57096289-57098761 Brachypodium distachyon
Bradi3g57630 1.0kb downstream 1.0kb downstream 1000 false Bd3: 57097762-57098761 Brachypodium distachyon
Bradi3g57630 2.0kb upstream 2.0kb upstream 3473 true Bd3: 57094289-57097761 Brachypodium distachyon
Bradi3g57630 2.0kb upstream 2.0kb upstream 2000 false Bd3: 57094289-57096288 Brachypodium distachyon
Bradi3g57630 2.0kb downstream 2.0kb downstream 3473 true Bd3: 57096289-57099761 Brachypodium distachyon
Bradi3g57630 2.0kb downstream 2.0kb downstream 2000 false Bd3: 57097762-57099761 Brachypodium distachyon
Bradi3g57630 5.0kb upstream 5.0kb upstream 6473 true Bd3: 57091289-57097761 Brachypodium distachyon
Bradi3g57630 5.0kb upstream 5.0kb upstream 5000 false Bd3: 57091289-57096288 Brachypodium distachyon
Bradi3g57630 5.0kb downstream 5.0kb downstream 6473 true Bd3: 57096289-57102761 Brachypodium distachyon
Bradi3g57630 5.0kb downstream 5.0kb downstream 5000 false Bd3: 57097762-57102761 Brachypodium distachyon
Bradi3g57630 10.0kb upstream 10.0kb upstream 11473 true Bd3: 57086289-57097761 Brachypodium distachyon
Bradi3g57630 10.0kb upstream 10.0kb upstream 10000 false Bd3: 57086289-57096288 Brachypodium distachyon
Bradi3g57630 10.0kb downstream 10.0kb downstream 11473 true Bd3: 57096289-57107761 Brachypodium distachyon
Bradi3g57630 10.0kb downstream 10.0kb downstream 10000 false Bd3: 57097762-57107761 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573463 5269 Grass View MSA
122050938 5273 Angiosperm View MSA
121344841 5274 Embryophyte View MSA
123380112 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.078     Low  
cufflinks 0.158        
cufflinks 0.134        
cufflinks 0.108        
cufflinks 0.111        
cufflinks 0.07     Low  
cufflinks 0.097        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.136        
cufflinks 0.052     Low  
cufflinks 0.136        
cufflinks 0.124        
cufflinks 0.079        
cufflinks 0.028     Low Low
cufflinks 0.074     Low  
cufflinks 0.115        
cufflinks 0.029     Low Low
cufflinks 0.745       High
cufflinks 0.27       High
cufflinks 0.048     Low  
cufflinks 0.113        
cufflinks 0.123     Low  
cufflinks 0.045     Low  
cufflinks 0.076     Low  
cufflinks 0.112        
cufflinks 0.146        
cufflinks 0.033     Low Low
cufflinks 0.095     Low  
cufflinks 0.062     Low  
cufflinks 0.087     Low  

0 Strain