Gene : Bradi3g57560 B. distachyon v3.1
Defline:  (1 of 1) PTHR13471 - TETRATRICOPEPTIDE-LIKE HELICAL Genomic Order:  7156
Name:  ? Bradi3g57560 Secondary Identifier:  ? PAC:32812295
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g57560 0.5kb upstream 0.5kb upstream 9632 true Bd3: 57021112-57030743 Brachypodium distachyon
Bradi3g57560 0.5kb upstream 0.5kb upstream 500 false Bd3: 57030244-57030743 Brachypodium distachyon
Bradi3g57560 0.5kb downstream 0.5kb downstream 9632 true Bd3: 57020612-57030243 Brachypodium distachyon
Bradi3g57560 0.5kb downstream 0.5kb downstream 500 false Bd3: 57020612-57021111 Brachypodium distachyon
Bradi3g57560 1.0kb upstream 1.0kb upstream 10132 true Bd3: 57021112-57031243 Brachypodium distachyon
Bradi3g57560 1.0kb upstream 1.0kb upstream 1000 false Bd3: 57030244-57031243 Brachypodium distachyon
Bradi3g57560 1.0kb downstream 1.0kb downstream 10132 true Bd3: 57020112-57030243 Brachypodium distachyon
Bradi3g57560 1.0kb downstream 1.0kb downstream 1000 false Bd3: 57020112-57021111 Brachypodium distachyon
Bradi3g57560 2.0kb upstream 2.0kb upstream 11132 true Bd3: 57021112-57032243 Brachypodium distachyon
Bradi3g57560 2.0kb upstream 2.0kb upstream 2000 false Bd3: 57030244-57032243 Brachypodium distachyon
Bradi3g57560 2.0kb downstream 2.0kb downstream 11132 true Bd3: 57019112-57030243 Brachypodium distachyon
Bradi3g57560 2.0kb downstream 2.0kb downstream 2000 false Bd3: 57019112-57021111 Brachypodium distachyon
Bradi3g57560 5.0kb upstream 5.0kb upstream 14132 true Bd3: 57021112-57035243 Brachypodium distachyon
Bradi3g57560 5.0kb upstream 5.0kb upstream 5000 false Bd3: 57030244-57035243 Brachypodium distachyon
Bradi3g57560 5.0kb downstream 5.0kb downstream 14132 true Bd3: 57016112-57030243 Brachypodium distachyon
Bradi3g57560 5.0kb downstream 5.0kb downstream 5000 false Bd3: 57016112-57021111 Brachypodium distachyon
Bradi3g57560 10.0kb upstream 10.0kb upstream 19132 true Bd3: 57021112-57040243 Brachypodium distachyon
Bradi3g57560 10.0kb upstream 10.0kb upstream 10000 false Bd3: 57030244-57040243 Brachypodium distachyon
Bradi3g57560 10.0kb downstream 10.0kb downstream 19132 true Bd3: 57011112-57030243 Brachypodium distachyon
Bradi3g57560 10.0kb downstream 10.0kb downstream 10000 false Bd3: 57011112-57021111 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026294 5273 Angiosperm View MSA
124568438 5269 Grass View MSA
121345312 5274 Embryophyte View MSA
123423930 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.747        
cufflinks 1.371        
cufflinks 1.248        
cufflinks 1.084        
cufflinks 0.321       Low
cufflinks 1.293        
cufflinks 1.178        
cufflinks 1.034        
cufflinks 1.249        
cufflinks 0.783        
cufflinks 1.322        
cufflinks 1.414        
cufflinks 1.221        
cufflinks 1.037        
cufflinks 0.766        
cufflinks 1.255        
cufflinks 0.651        
cufflinks 1.494        
cufflinks 0.828        
cufflinks 0.441       Low
cufflinks 0.695        
cufflinks 1.285        
cufflinks 1.097        
cufflinks 1.114        
cufflinks 1.145        
cufflinks 1.083        
cufflinks 1.401        
cufflinks 1.056        
cufflinks 1.004        
cufflinks 1.073        

0 Strain