Gene : Bradi3g57756 B. distachyon v3.1
Defline:  (1 of 2) PTHR23354:SF75 - LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 1 Genomic Order:  7178
Name:  ? Bradi3g57756 Secondary Identifier:  ? PAC:32814845
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g57756 0.5kb upstream 0.5kb upstream 4043 true Bd3: 57188690-57192732 Brachypodium distachyon
Bradi3g57756 0.5kb upstream 0.5kb upstream 500 false Bd3: 57188690-57189189 Brachypodium distachyon
Bradi3g57756 0.5kb downstream 0.5kb downstream 4043 true Bd3: 57189190-57193232 Brachypodium distachyon
Bradi3g57756 0.5kb downstream 0.5kb downstream 500 false Bd3: 57192733-57193232 Brachypodium distachyon
Bradi3g57756 1.0kb upstream 1.0kb upstream 4543 true Bd3: 57188190-57192732 Brachypodium distachyon
Bradi3g57756 1.0kb upstream 1.0kb upstream 1000 false Bd3: 57188190-57189189 Brachypodium distachyon
Bradi3g57756 1.0kb downstream 1.0kb downstream 4543 true Bd3: 57189190-57193732 Brachypodium distachyon
Bradi3g57756 1.0kb downstream 1.0kb downstream 1000 false Bd3: 57192733-57193732 Brachypodium distachyon
Bradi3g57756 2.0kb upstream 2.0kb upstream 5543 true Bd3: 57187190-57192732 Brachypodium distachyon
Bradi3g57756 2.0kb upstream 2.0kb upstream 2000 false Bd3: 57187190-57189189 Brachypodium distachyon
Bradi3g57756 2.0kb downstream 2.0kb downstream 5543 true Bd3: 57189190-57194732 Brachypodium distachyon
Bradi3g57756 2.0kb downstream 2.0kb downstream 2000 false Bd3: 57192733-57194732 Brachypodium distachyon
Bradi3g57756 5.0kb upstream 5.0kb upstream 8543 true Bd3: 57184190-57192732 Brachypodium distachyon
Bradi3g57756 5.0kb upstream 5.0kb upstream 5000 false Bd3: 57184190-57189189 Brachypodium distachyon
Bradi3g57756 5.0kb downstream 5.0kb downstream 8543 true Bd3: 57189190-57197732 Brachypodium distachyon
Bradi3g57756 5.0kb downstream 5.0kb downstream 5000 false Bd3: 57192733-57197732 Brachypodium distachyon
Bradi3g57756 10.0kb upstream 10.0kb upstream 13543 true Bd3: 57179190-57192732 Brachypodium distachyon
Bradi3g57756 10.0kb upstream 10.0kb upstream 10000 false Bd3: 57179190-57189189 Brachypodium distachyon
Bradi3g57756 10.0kb downstream 10.0kb downstream 13543 true Bd3: 57189190-57202732 Brachypodium distachyon
Bradi3g57756 10.0kb downstream 10.0kb downstream 10000 false Bd3: 57192733-57202732 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582526 5269 Grass View MSA
122046889 5273 Angiosperm View MSA
121350976 5274 Embryophyte View MSA
123381953 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.387        
cufflinks 0.567        
cufflinks 0.577        
cufflinks 0.377        
cufflinks 0.918       High
cufflinks 0.517        
cufflinks 0.622        
cufflinks 0.697        
cufflinks 0.604        
cufflinks 0.436        
cufflinks 0.177       Low
cufflinks 0.4        
cufflinks 0.152       Low
cufflinks 0.21       Low
cufflinks 0.36        
cufflinks 0.775        
cufflinks 0.692        
cufflinks 1.413       High
cufflinks 0.638        
cufflinks 0.176       Low
cufflinks 0.69        
cufflinks 0.406        
cufflinks 0.637        
cufflinks 0.487        
cufflinks 0.469        
cufflinks 0.579        
cufflinks 0.035     Low Low
cufflinks 0.54        
cufflinks 0.399        
cufflinks 0.737        

0 Strain