Gene : Bradi3g58197 B. distachyon v3.1
Defline:  (1 of 2) PTHR11071//PTHR11071:SF279 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE Genomic Order:  7236
Name:  ? Bradi3g58197 Secondary Identifier:  ? PAC:32823042
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g58197 0.5kb upstream 0.5kb upstream 6734 true Bd3: 57484385-57491118 Brachypodium distachyon
Bradi3g58197 0.5kb upstream 0.5kb upstream 500 false Bd3: 57490619-57491118 Brachypodium distachyon
Bradi3g58197 0.5kb downstream 0.5kb downstream 6734 true Bd3: 57483885-57490618 Brachypodium distachyon
Bradi3g58197 0.5kb downstream 0.5kb downstream 500 false Bd3: 57483885-57484384 Brachypodium distachyon
Bradi3g58197 1.0kb upstream 1.0kb upstream 7234 true Bd3: 57484385-57491618 Brachypodium distachyon
Bradi3g58197 1.0kb upstream 1.0kb upstream 1000 false Bd3: 57490619-57491618 Brachypodium distachyon
Bradi3g58197 1.0kb downstream 1.0kb downstream 7234 true Bd3: 57483385-57490618 Brachypodium distachyon
Bradi3g58197 1.0kb downstream 1.0kb downstream 1000 false Bd3: 57483385-57484384 Brachypodium distachyon
Bradi3g58197 2.0kb upstream 2.0kb upstream 8234 true Bd3: 57484385-57492618 Brachypodium distachyon
Bradi3g58197 2.0kb upstream 2.0kb upstream 2000 false Bd3: 57490619-57492618 Brachypodium distachyon
Bradi3g58197 2.0kb downstream 2.0kb downstream 8234 true Bd3: 57482385-57490618 Brachypodium distachyon
Bradi3g58197 2.0kb downstream 2.0kb downstream 2000 false Bd3: 57482385-57484384 Brachypodium distachyon
Bradi3g58197 5.0kb upstream 5.0kb upstream 11234 true Bd3: 57484385-57495618 Brachypodium distachyon
Bradi3g58197 5.0kb upstream 5.0kb upstream 5000 false Bd3: 57490619-57495618 Brachypodium distachyon
Bradi3g58197 5.0kb downstream 5.0kb downstream 11234 true Bd3: 57479385-57490618 Brachypodium distachyon
Bradi3g58197 5.0kb downstream 5.0kb downstream 5000 false Bd3: 57479385-57484384 Brachypodium distachyon
Bradi3g58197 10.0kb upstream 10.0kb upstream 16234 true Bd3: 57484385-57500618 Brachypodium distachyon
Bradi3g58197 10.0kb upstream 10.0kb upstream 10000 false Bd3: 57490619-57500618 Brachypodium distachyon
Bradi3g58197 10.0kb downstream 10.0kb downstream 16234 true Bd3: 57474385-57490618 Brachypodium distachyon
Bradi3g58197 10.0kb downstream 10.0kb downstream 10000 false Bd3: 57474385-57484384 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570649 5269 Grass View MSA
122048372 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121348447 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.802        
cufflinks 1.153        
cufflinks 1.161        
cufflinks 1.424        
cufflinks 0.551       Low
cufflinks 1.143        
cufflinks 1.266        
cufflinks 1.144        
cufflinks 1.175        
cufflinks 1.437        
cufflinks 0.98        
cufflinks 1.227        
cufflinks 0.69       Low
cufflinks 0.795        
cufflinks 0.996        
cufflinks 0.965        
cufflinks 1.242        
cufflinks 1.992       High
cufflinks 1.043        
cufflinks 0.388       Low
cufflinks 1.494        
cufflinks 1.247        
cufflinks 1.158        
cufflinks 1.126        
cufflinks 1.396        
cufflinks 1.032        
cufflinks 0.818        
cufflinks 1.322        
cufflinks 1.197        
cufflinks 1.158        

0 Strain