Gene : Bradi3g58166 B. distachyon v3.1
Defline:  (1 of 1) PTHR11851:SF68 - PRESEQUENCE PROTEASE 1, CHLOROPLASTIC/MITOCHONDRIAL-RELATED Genomic Order:  7232
Name:  ? Bradi3g58166 Secondary Identifier:  ? PAC:32817617
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g58166 0.5kb upstream 0.5kb upstream 8787 true Bd3: 57460108-57468894 Brachypodium distachyon
Bradi3g58166 0.5kb upstream 0.5kb upstream 500 false Bd3: 57468395-57468894 Brachypodium distachyon
Bradi3g58166 0.5kb downstream 0.5kb downstream 8787 true Bd3: 57459608-57468394 Brachypodium distachyon
Bradi3g58166 0.5kb downstream 0.5kb downstream 500 false Bd3: 57459608-57460107 Brachypodium distachyon
Bradi3g58166 1.0kb upstream 1.0kb upstream 9287 true Bd3: 57460108-57469394 Brachypodium distachyon
Bradi3g58166 1.0kb upstream 1.0kb upstream 1000 false Bd3: 57468395-57469394 Brachypodium distachyon
Bradi3g58166 1.0kb downstream 1.0kb downstream 9287 true Bd3: 57459108-57468394 Brachypodium distachyon
Bradi3g58166 1.0kb downstream 1.0kb downstream 1000 false Bd3: 57459108-57460107 Brachypodium distachyon
Bradi3g58166 2.0kb upstream 2.0kb upstream 10287 true Bd3: 57460108-57470394 Brachypodium distachyon
Bradi3g58166 2.0kb upstream 2.0kb upstream 2000 false Bd3: 57468395-57470394 Brachypodium distachyon
Bradi3g58166 2.0kb downstream 2.0kb downstream 10287 true Bd3: 57458108-57468394 Brachypodium distachyon
Bradi3g58166 2.0kb downstream 2.0kb downstream 2000 false Bd3: 57458108-57460107 Brachypodium distachyon
Bradi3g58166 5.0kb upstream 5.0kb upstream 13287 true Bd3: 57460108-57473394 Brachypodium distachyon
Bradi3g58166 5.0kb upstream 5.0kb upstream 5000 false Bd3: 57468395-57473394 Brachypodium distachyon
Bradi3g58166 5.0kb downstream 5.0kb downstream 13287 true Bd3: 57455108-57468394 Brachypodium distachyon
Bradi3g58166 5.0kb downstream 5.0kb downstream 5000 false Bd3: 57455108-57460107 Brachypodium distachyon
Bradi3g58166 10.0kb upstream 10.0kb upstream 18287 true Bd3: 57460108-57478394 Brachypodium distachyon
Bradi3g58166 10.0kb upstream 10.0kb upstream 10000 false Bd3: 57468395-57478394 Brachypodium distachyon
Bradi3g58166 10.0kb downstream 10.0kb downstream 18287 true Bd3: 57450108-57468394 Brachypodium distachyon
Bradi3g58166 10.0kb downstream 10.0kb downstream 10000 false Bd3: 57450108-57460107 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580072 5269 Grass View MSA
122042751 5273 Angiosperm View MSA
121343874 5274 Embryophyte View MSA
123424762 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 67.48     High  
cufflinks 84.538     High  
cufflinks 53.707     High  
cufflinks 68.79     High  
cufflinks 51.292     High  
cufflinks 92.819     High  
cufflinks 75.976     High  
cufflinks 79.468     High  
cufflinks 95.374     High  
cufflinks 32.226     High  
cufflinks 198.245     High High
cufflinks 86.856     High  
cufflinks 98.147     High  
cufflinks 155.379     High High
cufflinks 76.043     High  
cufflinks 97.055     High  
cufflinks 39.878     High  
cufflinks 15.726     High Low
cufflinks 35.685     High  
cufflinks 54.53     High  
cufflinks 15.726     High Low
cufflinks 55.063     High  
cufflinks 84.21     High  
cufflinks 94.9     High  
cufflinks 84.794     High  
cufflinks 41.971     High  
cufflinks 107.784     High High
cufflinks 37.829     High  
cufflinks 42.097     High  
cufflinks 29.263     High Low

0 Strain