Gene : Bradi3g58120 B. distachyon v3.1
Defline:  (1 of 1) K14168 - cytoplasmic tRNA 2-thiolation protein 1 (CTU1, NCS6) Genomic Order:  7227
Name:  ? Bradi3g58120 Secondary Identifier:  ? PAC:32823392
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g58120 0.5kb upstream 0.5kb upstream 3713 true Bd3: 57438714-57442426 Brachypodium distachyon
Bradi3g58120 0.5kb upstream 0.5kb upstream 500 false Bd3: 57438714-57439213 Brachypodium distachyon
Bradi3g58120 0.5kb downstream 0.5kb downstream 3713 true Bd3: 57439214-57442926 Brachypodium distachyon
Bradi3g58120 0.5kb downstream 0.5kb downstream 500 false Bd3: 57442427-57442926 Brachypodium distachyon
Bradi3g58120 1.0kb upstream 1.0kb upstream 4213 true Bd3: 57438214-57442426 Brachypodium distachyon
Bradi3g58120 1.0kb upstream 1.0kb upstream 1000 false Bd3: 57438214-57439213 Brachypodium distachyon
Bradi3g58120 1.0kb downstream 1.0kb downstream 4213 true Bd3: 57439214-57443426 Brachypodium distachyon
Bradi3g58120 1.0kb downstream 1.0kb downstream 1000 false Bd3: 57442427-57443426 Brachypodium distachyon
Bradi3g58120 2.0kb upstream 2.0kb upstream 5213 true Bd3: 57437214-57442426 Brachypodium distachyon
Bradi3g58120 2.0kb upstream 2.0kb upstream 2000 false Bd3: 57437214-57439213 Brachypodium distachyon
Bradi3g58120 2.0kb downstream 2.0kb downstream 5213 true Bd3: 57439214-57444426 Brachypodium distachyon
Bradi3g58120 2.0kb downstream 2.0kb downstream 2000 false Bd3: 57442427-57444426 Brachypodium distachyon
Bradi3g58120 5.0kb upstream 5.0kb upstream 8213 true Bd3: 57434214-57442426 Brachypodium distachyon
Bradi3g58120 5.0kb upstream 5.0kb upstream 5000 false Bd3: 57434214-57439213 Brachypodium distachyon
Bradi3g58120 5.0kb downstream 5.0kb downstream 8213 true Bd3: 57439214-57447426 Brachypodium distachyon
Bradi3g58120 5.0kb downstream 5.0kb downstream 5000 false Bd3: 57442427-57447426 Brachypodium distachyon
Bradi3g58120 10.0kb upstream 10.0kb upstream 13213 true Bd3: 57429214-57442426 Brachypodium distachyon
Bradi3g58120 10.0kb upstream 10.0kb upstream 10000 false Bd3: 57429214-57439213 Brachypodium distachyon
Bradi3g58120 10.0kb downstream 10.0kb downstream 13213 true Bd3: 57439214-57452426 Brachypodium distachyon
Bradi3g58120 10.0kb downstream 10.0kb downstream 10000 false Bd3: 57442427-57452426 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582937 5269 Grass View MSA
122048376 5273 Angiosperm View MSA
121346123 5274 Embryophyte View MSA
123424890 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.609        
cufflinks 5.967        
cufflinks 6.484        
cufflinks 6.788        
cufflinks 4.1       Low
cufflinks 5.287        
cufflinks 5.517        
cufflinks 5.143        
cufflinks 5.744        
cufflinks 7.439       High
cufflinks 6.51        
cufflinks 5.056        
cufflinks 4.697       Low
cufflinks 6.166        
cufflinks 4.902       Low
cufflinks 5.442        
cufflinks 5.609        
cufflinks 7.418       High
cufflinks 7.534       High
cufflinks 4.98       Low
cufflinks 6.598        
cufflinks 5.583        
cufflinks 5.524        
cufflinks 5.231        
cufflinks 6.4        
cufflinks 8.102       High
cufflinks 6.715        
cufflinks 6.992        
cufflinks 6.093        
cufflinks 5.714        

0 Strain