Gene : Bradi3g58310 B. distachyon v3.1
Defline:  (1 of 1) PTHR12096 - NUCLEAR PROTEIN SKIP-RELATED Genomic Order:  7251
Name:  ? Bradi3g58310 Secondary Identifier:  ? PAC:32813423
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g58310 0.5kb upstream 0.5kb upstream 4620 true Bd3: 57635899-57640518 Brachypodium distachyon
Bradi3g58310 0.5kb upstream 0.5kb upstream 500 false Bd3: 57635899-57636398 Brachypodium distachyon
Bradi3g58310 0.5kb downstream 0.5kb downstream 4620 true Bd3: 57636399-57641018 Brachypodium distachyon
Bradi3g58310 0.5kb downstream 0.5kb downstream 500 false Bd3: 57640519-57641018 Brachypodium distachyon
Bradi3g58310 1.0kb upstream 1.0kb upstream 5120 true Bd3: 57635399-57640518 Brachypodium distachyon
Bradi3g58310 1.0kb upstream 1.0kb upstream 1000 false Bd3: 57635399-57636398 Brachypodium distachyon
Bradi3g58310 1.0kb downstream 1.0kb downstream 5120 true Bd3: 57636399-57641518 Brachypodium distachyon
Bradi3g58310 1.0kb downstream 1.0kb downstream 1000 false Bd3: 57640519-57641518 Brachypodium distachyon
Bradi3g58310 2.0kb upstream 2.0kb upstream 6120 true Bd3: 57634399-57640518 Brachypodium distachyon
Bradi3g58310 2.0kb upstream 2.0kb upstream 2000 false Bd3: 57634399-57636398 Brachypodium distachyon
Bradi3g58310 2.0kb downstream 2.0kb downstream 6120 true Bd3: 57636399-57642518 Brachypodium distachyon
Bradi3g58310 2.0kb downstream 2.0kb downstream 2000 false Bd3: 57640519-57642518 Brachypodium distachyon
Bradi3g58310 5.0kb upstream 5.0kb upstream 9120 true Bd3: 57631399-57640518 Brachypodium distachyon
Bradi3g58310 5.0kb upstream 5.0kb upstream 5000 false Bd3: 57631399-57636398 Brachypodium distachyon
Bradi3g58310 5.0kb downstream 5.0kb downstream 9120 true Bd3: 57636399-57645518 Brachypodium distachyon
Bradi3g58310 5.0kb downstream 5.0kb downstream 5000 false Bd3: 57640519-57645518 Brachypodium distachyon
Bradi3g58310 10.0kb upstream 10.0kb upstream 14120 true Bd3: 57626399-57640518 Brachypodium distachyon
Bradi3g58310 10.0kb upstream 10.0kb upstream 10000 false Bd3: 57626399-57636398 Brachypodium distachyon
Bradi3g58310 10.0kb downstream 10.0kb downstream 14120 true Bd3: 57636399-57650518 Brachypodium distachyon
Bradi3g58310 10.0kb downstream 10.0kb downstream 10000 false Bd3: 57640519-57650518 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124583899 5269 Grass View MSA
122045671 5273 Angiosperm View MSA
121346165 5274 Embryophyte View MSA
123425869 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.902       High
cufflinks 4.466        
cufflinks 5.601        
cufflinks 3.88        
cufflinks 4.318        
cufflinks 4.281        
cufflinks 4.323        
cufflinks 3.441       Low
cufflinks 3.952        
cufflinks 4.456        
cufflinks 4.998        
cufflinks 4.537        
cufflinks 3.777        
cufflinks 3.659        
cufflinks 3.788        
cufflinks 4.433        
cufflinks 3.489        
cufflinks 5.725        
cufflinks 3.841        
cufflinks 4.636        
cufflinks 4.197        
cufflinks 5.736        
cufflinks 3.617        
cufflinks 3.689        
cufflinks 3.835        
cufflinks 5.648        
cufflinks 4.419        
cufflinks 5.389        
cufflinks 5.054        
cufflinks 6.624       High

0 Strain