Gene : Bradi4g27130 B. distachyon v3.1
Defline:  (1 of 12) K07904 - Ras-related protein Rab-11A (RAB11A) Genomic Order:  3455
Name:  ? Bradi4g27130 Secondary Identifier:  ? PAC:32788761
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g27130 0.5kb upstream 0.5kb upstream 5129 true Bd4: 32065473-32070601 Brachypodium distachyon
Bradi4g27130 0.5kb upstream 0.5kb upstream 500 false Bd4: 32065473-32065972 Brachypodium distachyon
Bradi4g27130 0.5kb downstream 0.5kb downstream 5129 true Bd4: 32065973-32071101 Brachypodium distachyon
Bradi4g27130 0.5kb downstream 0.5kb downstream 500 false Bd4: 32070602-32071101 Brachypodium distachyon
Bradi4g27130 1.0kb upstream 1.0kb upstream 5629 true Bd4: 32064973-32070601 Brachypodium distachyon
Bradi4g27130 1.0kb upstream 1.0kb upstream 1000 false Bd4: 32064973-32065972 Brachypodium distachyon
Bradi4g27130 1.0kb downstream 1.0kb downstream 5629 true Bd4: 32065973-32071601 Brachypodium distachyon
Bradi4g27130 1.0kb downstream 1.0kb downstream 1000 false Bd4: 32070602-32071601 Brachypodium distachyon
Bradi4g27130 2.0kb upstream 2.0kb upstream 6629 true Bd4: 32063973-32070601 Brachypodium distachyon
Bradi4g27130 2.0kb upstream 2.0kb upstream 2000 false Bd4: 32063973-32065972 Brachypodium distachyon
Bradi4g27130 2.0kb downstream 2.0kb downstream 6629 true Bd4: 32065973-32072601 Brachypodium distachyon
Bradi4g27130 2.0kb downstream 2.0kb downstream 2000 false Bd4: 32070602-32072601 Brachypodium distachyon
Bradi4g27130 5.0kb upstream 5.0kb upstream 9629 true Bd4: 32060973-32070601 Brachypodium distachyon
Bradi4g27130 5.0kb upstream 5.0kb upstream 5000 false Bd4: 32060973-32065972 Brachypodium distachyon
Bradi4g27130 5.0kb downstream 5.0kb downstream 9629 true Bd4: 32065973-32075601 Brachypodium distachyon
Bradi4g27130 5.0kb downstream 5.0kb downstream 5000 false Bd4: 32070602-32075601 Brachypodium distachyon
Bradi4g27130 10.0kb upstream 10.0kb upstream 14629 true Bd4: 32055973-32070601 Brachypodium distachyon
Bradi4g27130 10.0kb upstream 10.0kb upstream 10000 false Bd4: 32055973-32065972 Brachypodium distachyon
Bradi4g27130 10.0kb downstream 10.0kb downstream 14629 true Bd4: 32065973-32080601 Brachypodium distachyon
Bradi4g27130 10.0kb downstream 10.0kb downstream 10000 false Bd4: 32070602-32080601 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578948 5269 Grass View MSA
122041554 5273 Angiosperm View MSA
121351595 5274 Embryophyte View MSA
123426852 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.342        
cufflinks 1.065        
cufflinks 1.163        
cufflinks 0.844        
cufflinks 0.706        
cufflinks 1.136        
cufflinks 0.994        
cufflinks 1.024        
cufflinks 0.991        
cufflinks 0.921        
cufflinks 2.539       High
cufflinks 1.267        
cufflinks 1.142        
cufflinks 2.355       High
cufflinks 1.526        
cufflinks 1.567        
cufflinks 0.94        
cufflinks 2.43       High
cufflinks 1.752        
cufflinks 0.36       Low
cufflinks 0.721        
cufflinks 1.165        
cufflinks 0.93        
cufflinks 0.924        
cufflinks 1.105        
cufflinks 1.241        
cufflinks 1.053        
cufflinks 1.303        
cufflinks 1.063        
cufflinks 0.676       Low

0 Strain