Gene : Bradi3g58780 B. distachyon v3.1
Defline:  (1 of 1) PTHR10916 - 60S RIBOSOMAL PROTEIN L35/50S RIBOSOMAL PROTEIN L29 Genomic Order:  7283
Name:  ? Bradi3g58780 Secondary Identifier:  ? PAC:32820380
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g58780 0.5kb upstream 0.5kb upstream 2333 true Bd3: 57923955-57926287 Brachypodium distachyon
Bradi3g58780 0.5kb upstream 0.5kb upstream 500 false Bd3: 57925788-57926287 Brachypodium distachyon
Bradi3g58780 0.5kb downstream 0.5kb downstream 2333 true Bd3: 57923455-57925787 Brachypodium distachyon
Bradi3g58780 0.5kb downstream 0.5kb downstream 500 false Bd3: 57923455-57923954 Brachypodium distachyon
Bradi3g58780 1.0kb upstream 1.0kb upstream 2833 true Bd3: 57923955-57926787 Brachypodium distachyon
Bradi3g58780 1.0kb upstream 1.0kb upstream 1000 false Bd3: 57925788-57926787 Brachypodium distachyon
Bradi3g58780 1.0kb downstream 1.0kb downstream 2833 true Bd3: 57922955-57925787 Brachypodium distachyon
Bradi3g58780 1.0kb downstream 1.0kb downstream 1000 false Bd3: 57922955-57923954 Brachypodium distachyon
Bradi3g58780 2.0kb upstream 2.0kb upstream 3833 true Bd3: 57923955-57927787 Brachypodium distachyon
Bradi3g58780 2.0kb upstream 2.0kb upstream 2000 false Bd3: 57925788-57927787 Brachypodium distachyon
Bradi3g58780 2.0kb downstream 2.0kb downstream 3833 true Bd3: 57921955-57925787 Brachypodium distachyon
Bradi3g58780 2.0kb downstream 2.0kb downstream 2000 false Bd3: 57921955-57923954 Brachypodium distachyon
Bradi3g58780 5.0kb upstream 5.0kb upstream 6833 true Bd3: 57923955-57930787 Brachypodium distachyon
Bradi3g58780 5.0kb upstream 5.0kb upstream 5000 false Bd3: 57925788-57930787 Brachypodium distachyon
Bradi3g58780 5.0kb downstream 5.0kb downstream 6833 true Bd3: 57918955-57925787 Brachypodium distachyon
Bradi3g58780 5.0kb downstream 5.0kb downstream 5000 false Bd3: 57918955-57923954 Brachypodium distachyon
Bradi3g58780 10.0kb upstream 10.0kb upstream 11833 true Bd3: 57923955-57935787 Brachypodium distachyon
Bradi3g58780 10.0kb upstream 10.0kb upstream 10000 false Bd3: 57925788-57935787 Brachypodium distachyon
Bradi3g58780 10.0kb downstream 10.0kb downstream 11833 true Bd3: 57913955-57925787 Brachypodium distachyon
Bradi3g58780 10.0kb downstream 10.0kb downstream 10000 false Bd3: 57913955-57923954 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574500 5269 Grass View MSA
122048296 5273 Angiosperm View MSA
121344034 5274 Embryophyte View MSA
123424171 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 156.73     High  
cufflinks 113.976     High  
cufflinks 95.005     High  
cufflinks 147.675     High  
cufflinks 140.006     High  
cufflinks 84.216     High  
cufflinks 109.145     High  
cufflinks 77.897     High  
cufflinks 77.356     High  
cufflinks 245.068     High High
cufflinks 33.01     High Low
cufflinks 68.764     High  
cufflinks 35.701     High  
cufflinks 35.865     High  
cufflinks 105.641     High  
cufflinks 89.041     High  
cufflinks 194.082     High  
cufflinks 7.093       Low
cufflinks 135.176     High  
cufflinks 41.788     High  
cufflinks 78.201     High  
cufflinks 84.589     High  
cufflinks 71.74     High  
cufflinks 75.147     High  
cufflinks 124.58     High  
cufflinks 168.311     High  
cufflinks 19.792     High Low
cufflinks 159.2     High  
cufflinks 134.09     High  
cufflinks 109.935     High  

0 Strain