Gene : Bradi3g54740 B. distachyon v3.1
Defline:  (1 of 3) K12471 - epsin (EPN) Genomic Order:  6805
Name:  ? Bradi3g54740 Secondary Identifier:  ? PAC:32822439
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g54740 0.5kb upstream 0.5kb upstream 5995 true Bd3: 54906109-54912103 Brachypodium distachyon
Bradi3g54740 0.5kb upstream 0.5kb upstream 500 false Bd3: 54911604-54912103 Brachypodium distachyon
Bradi3g54740 0.5kb downstream 0.5kb downstream 5995 true Bd3: 54905609-54911603 Brachypodium distachyon
Bradi3g54740 0.5kb downstream 0.5kb downstream 500 false Bd3: 54905609-54906108 Brachypodium distachyon
Bradi3g54740 1.0kb upstream 1.0kb upstream 6495 true Bd3: 54906109-54912603 Brachypodium distachyon
Bradi3g54740 1.0kb upstream 1.0kb upstream 1000 false Bd3: 54911604-54912603 Brachypodium distachyon
Bradi3g54740 1.0kb downstream 1.0kb downstream 6495 true Bd3: 54905109-54911603 Brachypodium distachyon
Bradi3g54740 1.0kb downstream 1.0kb downstream 1000 false Bd3: 54905109-54906108 Brachypodium distachyon
Bradi3g54740 2.0kb upstream 2.0kb upstream 7495 true Bd3: 54906109-54913603 Brachypodium distachyon
Bradi3g54740 2.0kb upstream 2.0kb upstream 2000 false Bd3: 54911604-54913603 Brachypodium distachyon
Bradi3g54740 2.0kb downstream 2.0kb downstream 7495 true Bd3: 54904109-54911603 Brachypodium distachyon
Bradi3g54740 2.0kb downstream 2.0kb downstream 2000 false Bd3: 54904109-54906108 Brachypodium distachyon
Bradi3g54740 5.0kb upstream 5.0kb upstream 10495 true Bd3: 54906109-54916603 Brachypodium distachyon
Bradi3g54740 5.0kb upstream 5.0kb upstream 5000 false Bd3: 54911604-54916603 Brachypodium distachyon
Bradi3g54740 5.0kb downstream 5.0kb downstream 10495 true Bd3: 54901109-54911603 Brachypodium distachyon
Bradi3g54740 5.0kb downstream 5.0kb downstream 5000 false Bd3: 54901109-54906108 Brachypodium distachyon
Bradi3g54740 10.0kb upstream 10.0kb upstream 15495 true Bd3: 54906109-54921603 Brachypodium distachyon
Bradi3g54740 10.0kb upstream 10.0kb upstream 10000 false Bd3: 54911604-54921603 Brachypodium distachyon
Bradi3g54740 10.0kb downstream 10.0kb downstream 15495 true Bd3: 54896109-54911603 Brachypodium distachyon
Bradi3g54740 10.0kb downstream 10.0kb downstream 10000 false Bd3: 54896109-54906108 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572143 5269 Grass View MSA
122043253 5273 Angiosperm View MSA
121347121 5274 Embryophyte View MSA
123428144 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.683        
cufflinks 10.363     High  
cufflinks 12.413     High  
cufflinks 8.26        
cufflinks 5.285        
cufflinks 8.533        
cufflinks 8.363        
cufflinks 10.04     High  
cufflinks 9.202        
cufflinks 5.056        
cufflinks 5.771        
cufflinks 11.671     High  
cufflinks 4.44       Low
cufflinks 2.899       Low
cufflinks 8.884     High  
cufflinks 10.406     High  
cufflinks 4.589       Low
cufflinks 23.195     High High
cufflinks 9.249        
cufflinks 5.164        
cufflinks 11.647     High  
cufflinks 10.838     High  
cufflinks 9.255     High  
cufflinks 8.051        
cufflinks 6.428        
cufflinks 9.854        
cufflinks 5.033        
cufflinks 9.357        
cufflinks 8.859        
cufflinks 19.779     High High

0 Strain