Gene : Bradi3g54980 B. distachyon v3.1
Defline:  (1 of 1) PTHR22572:SF7 - TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON Genomic Order:  6835
Name:  ? Bradi3g54980 Secondary Identifier:  ? PAC:32817006
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g54980 0.5kb upstream 0.5kb upstream 6962 true Bd3: 55114417-55121378 Brachypodium distachyon
Bradi3g54980 0.5kb upstream 0.5kb upstream 500 false Bd3: 55114417-55114916 Brachypodium distachyon
Bradi3g54980 0.5kb downstream 0.5kb downstream 6962 true Bd3: 55114917-55121878 Brachypodium distachyon
Bradi3g54980 0.5kb downstream 0.5kb downstream 500 false Bd3: 55121379-55121878 Brachypodium distachyon
Bradi3g54980 1.0kb upstream 1.0kb upstream 7462 true Bd3: 55113917-55121378 Brachypodium distachyon
Bradi3g54980 1.0kb upstream 1.0kb upstream 1000 false Bd3: 55113917-55114916 Brachypodium distachyon
Bradi3g54980 1.0kb downstream 1.0kb downstream 7462 true Bd3: 55114917-55122378 Brachypodium distachyon
Bradi3g54980 1.0kb downstream 1.0kb downstream 1000 false Bd3: 55121379-55122378 Brachypodium distachyon
Bradi3g54980 2.0kb upstream 2.0kb upstream 8462 true Bd3: 55112917-55121378 Brachypodium distachyon
Bradi3g54980 2.0kb upstream 2.0kb upstream 2000 false Bd3: 55112917-55114916 Brachypodium distachyon
Bradi3g54980 2.0kb downstream 2.0kb downstream 8462 true Bd3: 55114917-55123378 Brachypodium distachyon
Bradi3g54980 2.0kb downstream 2.0kb downstream 2000 false Bd3: 55121379-55123378 Brachypodium distachyon
Bradi3g54980 5.0kb upstream 5.0kb upstream 11462 true Bd3: 55109917-55121378 Brachypodium distachyon
Bradi3g54980 5.0kb upstream 5.0kb upstream 5000 false Bd3: 55109917-55114916 Brachypodium distachyon
Bradi3g54980 5.0kb downstream 5.0kb downstream 11462 true Bd3: 55114917-55126378 Brachypodium distachyon
Bradi3g54980 5.0kb downstream 5.0kb downstream 5000 false Bd3: 55121379-55126378 Brachypodium distachyon
Bradi3g54980 10.0kb upstream 10.0kb upstream 16462 true Bd3: 55104917-55121378 Brachypodium distachyon
Bradi3g54980 10.0kb upstream 10.0kb upstream 10000 false Bd3: 55104917-55114916 Brachypodium distachyon
Bradi3g54980 10.0kb downstream 10.0kb downstream 16462 true Bd3: 55114917-55131378 Brachypodium distachyon
Bradi3g54980 10.0kb downstream 10.0kb downstream 10000 false Bd3: 55121379-55131378 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570610 5269 Grass View MSA
122041761 5273 Angiosperm View MSA
121347113 5274 Embryophyte View MSA
123426650 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.036        
cufflinks 2.82        
cufflinks 3.131        
cufflinks 2.551        
cufflinks 1.084       Low
cufflinks 2.565        
cufflinks 2.265        
cufflinks 1.78        
cufflinks 2.461        
cufflinks 2.293        
cufflinks 1.512        
cufflinks 2.505        
cufflinks 1.231       Low
cufflinks 1.326       Low
cufflinks 1.84        
cufflinks 2.527        
cufflinks 1.787        
cufflinks 3.814       High
cufflinks 2.454        
cufflinks 0.896       Low
cufflinks 2.277        
cufflinks 3.29       High
cufflinks 1.856        
cufflinks 2.178        
cufflinks 2.725        
cufflinks 3.015        
cufflinks 1.795        
cufflinks 3.079        
cufflinks 2.858        
cufflinks 3.012        

0 Strain