Gene : Bradi3g55160 B. distachyon v3.1
Defline:  (1 of 1) 2.7.7.1 - Nicotinamide-nucleotide adenylyltransferase / NMNAT Genomic Order:  6857
Name:  ? Bradi3g55160 Secondary Identifier:  ? PAC:32816276
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-5381 Brachypodium distachyon pathologic  
Bdistachyon PWY-5653 Brachypodium distachyon pathologic  
Bdistachyon PYRIDNUCSYN-PWY Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g55160 0.5kb upstream 0.5kb upstream 2552 true Bd3: 55227736-55230287 Brachypodium distachyon
Bradi3g55160 0.5kb upstream 0.5kb upstream 500 false Bd3: 55229788-55230287 Brachypodium distachyon
Bradi3g55160 0.5kb downstream 0.5kb downstream 2552 true Bd3: 55227236-55229787 Brachypodium distachyon
Bradi3g55160 0.5kb downstream 0.5kb downstream 500 false Bd3: 55227236-55227735 Brachypodium distachyon
Bradi3g55160 1.0kb upstream 1.0kb upstream 3052 true Bd3: 55227736-55230787 Brachypodium distachyon
Bradi3g55160 1.0kb upstream 1.0kb upstream 1000 false Bd3: 55229788-55230787 Brachypodium distachyon
Bradi3g55160 1.0kb downstream 1.0kb downstream 3052 true Bd3: 55226736-55229787 Brachypodium distachyon
Bradi3g55160 1.0kb downstream 1.0kb downstream 1000 false Bd3: 55226736-55227735 Brachypodium distachyon
Bradi3g55160 2.0kb upstream 2.0kb upstream 4052 true Bd3: 55227736-55231787 Brachypodium distachyon
Bradi3g55160 2.0kb upstream 2.0kb upstream 2000 false Bd3: 55229788-55231787 Brachypodium distachyon
Bradi3g55160 2.0kb downstream 2.0kb downstream 4052 true Bd3: 55225736-55229787 Brachypodium distachyon
Bradi3g55160 2.0kb downstream 2.0kb downstream 2000 false Bd3: 55225736-55227735 Brachypodium distachyon
Bradi3g55160 5.0kb upstream 5.0kb upstream 7052 true Bd3: 55227736-55234787 Brachypodium distachyon
Bradi3g55160 5.0kb upstream 5.0kb upstream 5000 false Bd3: 55229788-55234787 Brachypodium distachyon
Bradi3g55160 5.0kb downstream 5.0kb downstream 7052 true Bd3: 55222736-55229787 Brachypodium distachyon
Bradi3g55160 5.0kb downstream 5.0kb downstream 5000 false Bd3: 55222736-55227735 Brachypodium distachyon
Bradi3g55160 10.0kb upstream 10.0kb upstream 12052 true Bd3: 55227736-55239787 Brachypodium distachyon
Bradi3g55160 10.0kb upstream 10.0kb upstream 10000 false Bd3: 55229788-55239787 Brachypodium distachyon
Bradi3g55160 10.0kb downstream 10.0kb downstream 12052 true Bd3: 55217736-55229787 Brachypodium distachyon
Bradi3g55160 10.0kb downstream 10.0kb downstream 10000 false Bd3: 55217736-55227735 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575073 5269 Grass View MSA
122041896 5273 Angiosperm View MSA
121349173 5274 Embryophyte View MSA
123427443 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.734        
cufflinks 0.863        
cufflinks 0.978        
cufflinks 0.99        
cufflinks 0.497       Low
cufflinks 0.867        
cufflinks 0.872        
cufflinks 1.018        
cufflinks 1.077        
cufflinks 1.408       High
cufflinks 0.735        
cufflinks 0.779        
cufflinks 0.672       Low
cufflinks 0.712        
cufflinks 1.016        
cufflinks 0.701        
cufflinks 1.116        
cufflinks 1.02        
cufflinks 0.767        
cufflinks 0.8        
cufflinks 1.835       High
cufflinks 0.774        
cufflinks 0.996        
cufflinks 0.931        
cufflinks 0.994        
cufflinks 1.487       High
cufflinks 1.402       High
cufflinks 1.177        
cufflinks 1.028        
cufflinks 1.074        

0 Strain