Gene : Bradi4g27960 B. distachyon v3.1
Defline:  (1 of 3) PTHR11119//PTHR11119:SF47 - XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER // SUBFAMILY NOT NAMED Genomic Order:  3568
Name:  ? Bradi4g27960 Secondary Identifier:  ? PAC:32783516
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g27960 0.5kb upstream 0.5kb upstream 6312 true Bd4: 33193056-33199367 Brachypodium distachyon
Bradi4g27960 0.5kb upstream 0.5kb upstream 500 false Bd4: 33193056-33193555 Brachypodium distachyon
Bradi4g27960 0.5kb downstream 0.5kb downstream 6312 true Bd4: 33193556-33199867 Brachypodium distachyon
Bradi4g27960 0.5kb downstream 0.5kb downstream 500 false Bd4: 33199368-33199867 Brachypodium distachyon
Bradi4g27960 1.0kb upstream 1.0kb upstream 6812 true Bd4: 33192556-33199367 Brachypodium distachyon
Bradi4g27960 1.0kb upstream 1.0kb upstream 1000 false Bd4: 33192556-33193555 Brachypodium distachyon
Bradi4g27960 1.0kb downstream 1.0kb downstream 6812 true Bd4: 33193556-33200367 Brachypodium distachyon
Bradi4g27960 1.0kb downstream 1.0kb downstream 1000 false Bd4: 33199368-33200367 Brachypodium distachyon
Bradi4g27960 2.0kb upstream 2.0kb upstream 7812 true Bd4: 33191556-33199367 Brachypodium distachyon
Bradi4g27960 2.0kb upstream 2.0kb upstream 2000 false Bd4: 33191556-33193555 Brachypodium distachyon
Bradi4g27960 2.0kb downstream 2.0kb downstream 7812 true Bd4: 33193556-33201367 Brachypodium distachyon
Bradi4g27960 2.0kb downstream 2.0kb downstream 2000 false Bd4: 33199368-33201367 Brachypodium distachyon
Bradi4g27960 5.0kb upstream 5.0kb upstream 10812 true Bd4: 33188556-33199367 Brachypodium distachyon
Bradi4g27960 5.0kb upstream 5.0kb upstream 5000 false Bd4: 33188556-33193555 Brachypodium distachyon
Bradi4g27960 5.0kb downstream 5.0kb downstream 10812 true Bd4: 33193556-33204367 Brachypodium distachyon
Bradi4g27960 5.0kb downstream 5.0kb downstream 5000 false Bd4: 33199368-33204367 Brachypodium distachyon
Bradi4g27960 10.0kb upstream 10.0kb upstream 15812 true Bd4: 33183556-33199367 Brachypodium distachyon
Bradi4g27960 10.0kb upstream 10.0kb upstream 10000 false Bd4: 33183556-33193555 Brachypodium distachyon
Bradi4g27960 10.0kb downstream 10.0kb downstream 15812 true Bd4: 33193556-33209367 Brachypodium distachyon
Bradi4g27960 10.0kb downstream 10.0kb downstream 10000 false Bd4: 33199368-33209367 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574322 5269 Grass View MSA
122044330 5273 Angiosperm View MSA
121348988 5274 Embryophyte View MSA
123428829 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.129        
cufflinks 2.594        
cufflinks 3.722       High
cufflinks 1.89        
cufflinks 0.907        
cufflinks 1.852        
cufflinks 1.905        
cufflinks 1.463        
cufflinks 1.638        
cufflinks 2.59        
cufflinks 1.069        
cufflinks 1.783        
cufflinks 0.638        
cufflinks 0.369       Low
cufflinks 0.493       Low
cufflinks 2.459        
cufflinks 1.211        
cufflinks 7.98       High
cufflinks 2.199        
cufflinks 0.211       Low
cufflinks 2.372        
cufflinks 2.965        
cufflinks 1.349        
cufflinks 1.248        
cufflinks 1.44        
cufflinks 3.925       High
cufflinks 0.747        
cufflinks 4.11       High
cufflinks 3.483       High
cufflinks 3.27        

0 Strain