Gene : Bradi3g55330 B. distachyon v3.1
Genomic Order:  6876 Name:  ? Bradi3g55330
Secondary Identifier:  ? PAC:32813110
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g55330 0.5kb upstream 0.5kb upstream 2059 true Bd3: 55333918-55335976 Brachypodium distachyon
Bradi3g55330 0.5kb upstream 0.5kb upstream 500 false Bd3: 55335477-55335976 Brachypodium distachyon
Bradi3g55330 0.5kb downstream 0.5kb downstream 2059 true Bd3: 55333418-55335476 Brachypodium distachyon
Bradi3g55330 0.5kb downstream 0.5kb downstream 500 false Bd3: 55333418-55333917 Brachypodium distachyon
Bradi3g55330 1.0kb upstream 1.0kb upstream 2559 true Bd3: 55333918-55336476 Brachypodium distachyon
Bradi3g55330 1.0kb upstream 1.0kb upstream 1000 false Bd3: 55335477-55336476 Brachypodium distachyon
Bradi3g55330 1.0kb downstream 1.0kb downstream 2559 true Bd3: 55332918-55335476 Brachypodium distachyon
Bradi3g55330 1.0kb downstream 1.0kb downstream 1000 false Bd3: 55332918-55333917 Brachypodium distachyon
Bradi3g55330 2.0kb upstream 2.0kb upstream 3559 true Bd3: 55333918-55337476 Brachypodium distachyon
Bradi3g55330 2.0kb upstream 2.0kb upstream 2000 false Bd3: 55335477-55337476 Brachypodium distachyon
Bradi3g55330 2.0kb downstream 2.0kb downstream 3559 true Bd3: 55331918-55335476 Brachypodium distachyon
Bradi3g55330 2.0kb downstream 2.0kb downstream 2000 false Bd3: 55331918-55333917 Brachypodium distachyon
Bradi3g55330 5.0kb upstream 5.0kb upstream 6559 true Bd3: 55333918-55340476 Brachypodium distachyon
Bradi3g55330 5.0kb upstream 5.0kb upstream 5000 false Bd3: 55335477-55340476 Brachypodium distachyon
Bradi3g55330 5.0kb downstream 5.0kb downstream 6559 true Bd3: 55328918-55335476 Brachypodium distachyon
Bradi3g55330 5.0kb downstream 5.0kb downstream 5000 false Bd3: 55328918-55333917 Brachypodium distachyon
Bradi3g55330 10.0kb upstream 10.0kb upstream 11559 true Bd3: 55333918-55345476 Brachypodium distachyon
Bradi3g55330 10.0kb upstream 10.0kb upstream 10000 false Bd3: 55335477-55345476 Brachypodium distachyon
Bradi3g55330 10.0kb downstream 10.0kb downstream 11559 true Bd3: 55323918-55335476 Brachypodium distachyon
Bradi3g55330 10.0kb downstream 10.0kb downstream 10000 false Bd3: 55323918-55333917 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574802 5269 Grass View MSA
122042241 5273 Angiosperm View MSA
121345481 5274 Embryophyte View MSA
123380226 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.796        
cufflinks 3.515        
cufflinks 3.732        
cufflinks 5.491        
cufflinks 9.25     High  
cufflinks 4.33        
cufflinks 3.357        
cufflinks 4.418        
cufflinks 4.741        
cufflinks 8.832        
cufflinks 2.016       Low
cufflinks 3.529        
cufflinks 2.808       Low
cufflinks 2.353       Low
cufflinks 9.016     High  
cufflinks 2.971       Low
cufflinks 8.886        
cufflinks 5.345        
cufflinks 4.391        
cufflinks 5.931        
cufflinks 11.02       High
cufflinks 5.069        
cufflinks 5.013        
cufflinks 5.414        
cufflinks 5.748        
cufflinks 6.036        
cufflinks 1.974       Low
cufflinks 6.17        
cufflinks 7.638        
cufflinks 8.675        

0 Strain