Gene : Bradi3g55370 B. distachyon v3.1
Defline:  (1 of 2) PTHR18829:SF0 - YAE1 DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  6882
Name:  ? Bradi3g55370 Secondary Identifier:  ? PAC:32819545
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g55370 0.5kb upstream 0.5kb upstream 3365 true Bd3: 55382798-55386162 Brachypodium distachyon
Bradi3g55370 0.5kb upstream 0.5kb upstream 500 false Bd3: 55385663-55386162 Brachypodium distachyon
Bradi3g55370 0.5kb downstream 0.5kb downstream 3365 true Bd3: 55382298-55385662 Brachypodium distachyon
Bradi3g55370 0.5kb downstream 0.5kb downstream 500 false Bd3: 55382298-55382797 Brachypodium distachyon
Bradi3g55370 1.0kb upstream 1.0kb upstream 3865 true Bd3: 55382798-55386662 Brachypodium distachyon
Bradi3g55370 1.0kb upstream 1.0kb upstream 1000 false Bd3: 55385663-55386662 Brachypodium distachyon
Bradi3g55370 1.0kb downstream 1.0kb downstream 3865 true Bd3: 55381798-55385662 Brachypodium distachyon
Bradi3g55370 1.0kb downstream 1.0kb downstream 1000 false Bd3: 55381798-55382797 Brachypodium distachyon
Bradi3g55370 2.0kb upstream 2.0kb upstream 4865 true Bd3: 55382798-55387662 Brachypodium distachyon
Bradi3g55370 2.0kb upstream 2.0kb upstream 2000 false Bd3: 55385663-55387662 Brachypodium distachyon
Bradi3g55370 2.0kb downstream 2.0kb downstream 4865 true Bd3: 55380798-55385662 Brachypodium distachyon
Bradi3g55370 2.0kb downstream 2.0kb downstream 2000 false Bd3: 55380798-55382797 Brachypodium distachyon
Bradi3g55370 5.0kb upstream 5.0kb upstream 7865 true Bd3: 55382798-55390662 Brachypodium distachyon
Bradi3g55370 5.0kb upstream 5.0kb upstream 5000 false Bd3: 55385663-55390662 Brachypodium distachyon
Bradi3g55370 5.0kb downstream 5.0kb downstream 7865 true Bd3: 55377798-55385662 Brachypodium distachyon
Bradi3g55370 5.0kb downstream 5.0kb downstream 5000 false Bd3: 55377798-55382797 Brachypodium distachyon
Bradi3g55370 10.0kb upstream 10.0kb upstream 12865 true Bd3: 55382798-55395662 Brachypodium distachyon
Bradi3g55370 10.0kb upstream 10.0kb upstream 10000 false Bd3: 55385663-55395662 Brachypodium distachyon
Bradi3g55370 10.0kb downstream 10.0kb downstream 12865 true Bd3: 55372798-55385662 Brachypodium distachyon
Bradi3g55370 10.0kb downstream 10.0kb downstream 10000 false Bd3: 55372798-55382797 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582811 5269 Grass View MSA
122051590 5273 Angiosperm View MSA
121347249 5274 Embryophyte View MSA
123426251 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.628     High  
cufflinks 11.458     High  
cufflinks 6.515       Low
cufflinks 7.659        
cufflinks 10.979     High  
cufflinks 14.226     High  
cufflinks 15.517     High  
cufflinks 8.32        
cufflinks 11.589     High  
cufflinks 7.277        
cufflinks 13.858     High  
cufflinks 10.084     High  
cufflinks 9.966     High  
cufflinks 11.851     High  
cufflinks 5.571       Low
cufflinks 11.958     High  
cufflinks 9.168        
cufflinks 9.414        
cufflinks 26.003     High High
cufflinks 18.13     High High
cufflinks 12.873     High  
cufflinks 7.25       Low
cufflinks 9.179     High  
cufflinks 12.251     High  
cufflinks 15.276     High  
cufflinks 8.267        
cufflinks 17.308     High High
cufflinks 7.728        
cufflinks 7.543        
cufflinks 11.336     High  

0 Strain