Gene : Bradi3g55590 B. distachyon v3.1
Defline:  (1 of 1) PTHR20922:SF13 - DNL-TYPE ZINC FINGER PROTEIN Genomic Order:  6911
Name:  ? Bradi3g55590 Secondary Identifier:  ? PAC:32812841
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g55590 0.5kb upstream 0.5kb upstream 2017 true Bd3: 55557280-55559296 Brachypodium distachyon
Bradi3g55590 0.5kb upstream 0.5kb upstream 500 false Bd3: 55558797-55559296 Brachypodium distachyon
Bradi3g55590 0.5kb downstream 0.5kb downstream 2017 true Bd3: 55556780-55558796 Brachypodium distachyon
Bradi3g55590 0.5kb downstream 0.5kb downstream 500 false Bd3: 55556780-55557279 Brachypodium distachyon
Bradi3g55590 1.0kb upstream 1.0kb upstream 2517 true Bd3: 55557280-55559796 Brachypodium distachyon
Bradi3g55590 1.0kb upstream 1.0kb upstream 1000 false Bd3: 55558797-55559796 Brachypodium distachyon
Bradi3g55590 1.0kb downstream 1.0kb downstream 2517 true Bd3: 55556280-55558796 Brachypodium distachyon
Bradi3g55590 1.0kb downstream 1.0kb downstream 1000 false Bd3: 55556280-55557279 Brachypodium distachyon
Bradi3g55590 2.0kb upstream 2.0kb upstream 3517 true Bd3: 55557280-55560796 Brachypodium distachyon
Bradi3g55590 2.0kb upstream 2.0kb upstream 2000 false Bd3: 55558797-55560796 Brachypodium distachyon
Bradi3g55590 2.0kb downstream 2.0kb downstream 3517 true Bd3: 55555280-55558796 Brachypodium distachyon
Bradi3g55590 2.0kb downstream 2.0kb downstream 2000 false Bd3: 55555280-55557279 Brachypodium distachyon
Bradi3g55590 5.0kb upstream 5.0kb upstream 6517 true Bd3: 55557280-55563796 Brachypodium distachyon
Bradi3g55590 5.0kb upstream 5.0kb upstream 5000 false Bd3: 55558797-55563796 Brachypodium distachyon
Bradi3g55590 5.0kb downstream 5.0kb downstream 6517 true Bd3: 55552280-55558796 Brachypodium distachyon
Bradi3g55590 5.0kb downstream 5.0kb downstream 5000 false Bd3: 55552280-55557279 Brachypodium distachyon
Bradi3g55590 10.0kb upstream 10.0kb upstream 11517 true Bd3: 55557280-55568796 Brachypodium distachyon
Bradi3g55590 10.0kb upstream 10.0kb upstream 10000 false Bd3: 55558797-55568796 Brachypodium distachyon
Bradi3g55590 10.0kb downstream 10.0kb downstream 11517 true Bd3: 55547280-55558796 Brachypodium distachyon
Bradi3g55590 10.0kb downstream 10.0kb downstream 10000 false Bd3: 55547280-55557279 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572960 5269 Grass View MSA
122044958 5273 Angiosperm View MSA
121348718 5274 Embryophyte View MSA
123424658 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.699        
cufflinks 3.559        
cufflinks 3.054        
cufflinks 3.905        
cufflinks 6.918       High
cufflinks 3.141        
cufflinks 3.294        
cufflinks 4.223        
cufflinks 3.299        
cufflinks 4.06        
cufflinks 2.954        
cufflinks 2.683       Low
cufflinks 2.862       Low
cufflinks 3.287        
cufflinks 5.534        
cufflinks 2.472       Low
cufflinks 5.263        
cufflinks 3.515        
cufflinks 6.772       High
cufflinks 10.086       High
cufflinks 5.378        
cufflinks 2.824       Low
cufflinks 4.451        
cufflinks 3.919        
cufflinks 3.612        
cufflinks 3.26        
cufflinks 4.123        
cufflinks 3.356        
cufflinks 3.526        
cufflinks 3.536        

0 Strain