Gene : Bradi3g55510 B. distachyon v3.1
Defline:  (1 of 1) PTHR22883//PTHR22883:SF19 - ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN // PROTEIN S-ACYLTRANSFERASE 15-RELATED Genomic Order:  6902
Name:  ? Bradi3g55510 Secondary Identifier:  ? PAC:32812159
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g55510 0.5kb upstream 0.5kb upstream 3151 true Bd3: 55502810-55505960 Brachypodium distachyon
Bradi3g55510 0.5kb upstream 0.5kb upstream 500 false Bd3: 55502810-55503309 Brachypodium distachyon
Bradi3g55510 0.5kb downstream 0.5kb downstream 3151 true Bd3: 55503310-55506460 Brachypodium distachyon
Bradi3g55510 0.5kb downstream 0.5kb downstream 500 false Bd3: 55505961-55506460 Brachypodium distachyon
Bradi3g55510 1.0kb upstream 1.0kb upstream 3651 true Bd3: 55502310-55505960 Brachypodium distachyon
Bradi3g55510 1.0kb upstream 1.0kb upstream 1000 false Bd3: 55502310-55503309 Brachypodium distachyon
Bradi3g55510 1.0kb downstream 1.0kb downstream 3651 true Bd3: 55503310-55506960 Brachypodium distachyon
Bradi3g55510 1.0kb downstream 1.0kb downstream 1000 false Bd3: 55505961-55506960 Brachypodium distachyon
Bradi3g55510 2.0kb upstream 2.0kb upstream 4651 true Bd3: 55501310-55505960 Brachypodium distachyon
Bradi3g55510 2.0kb upstream 2.0kb upstream 2000 false Bd3: 55501310-55503309 Brachypodium distachyon
Bradi3g55510 2.0kb downstream 2.0kb downstream 4651 true Bd3: 55503310-55507960 Brachypodium distachyon
Bradi3g55510 2.0kb downstream 2.0kb downstream 2000 false Bd3: 55505961-55507960 Brachypodium distachyon
Bradi3g55510 5.0kb upstream 5.0kb upstream 7651 true Bd3: 55498310-55505960 Brachypodium distachyon
Bradi3g55510 5.0kb upstream 5.0kb upstream 5000 false Bd3: 55498310-55503309 Brachypodium distachyon
Bradi3g55510 5.0kb downstream 5.0kb downstream 7651 true Bd3: 55503310-55510960 Brachypodium distachyon
Bradi3g55510 5.0kb downstream 5.0kb downstream 5000 false Bd3: 55505961-55510960 Brachypodium distachyon
Bradi3g55510 10.0kb upstream 10.0kb upstream 12651 true Bd3: 55493310-55505960 Brachypodium distachyon
Bradi3g55510 10.0kb upstream 10.0kb upstream 10000 false Bd3: 55493310-55503309 Brachypodium distachyon
Bradi3g55510 10.0kb downstream 10.0kb downstream 12651 true Bd3: 55503310-55515960 Brachypodium distachyon
Bradi3g55510 10.0kb downstream 10.0kb downstream 10000 false Bd3: 55505961-55515960 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570835 5269 Grass View MSA
122049119 5273 Angiosperm View MSA
121349855 5274 Embryophyte View MSA
123428148 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.229     High  
cufflinks 6.549       Low
cufflinks 8.633        
cufflinks 8.816        
cufflinks 12.142     High  
cufflinks 6.401       Low
cufflinks 6.209       Low
cufflinks 7.875        
cufflinks 7.543        
cufflinks 15.751     High High
cufflinks 6.644       Low
cufflinks 6.542       Low
cufflinks 7.18        
cufflinks 6.727       Low
cufflinks 11.362     High  
cufflinks 6.151       Low
cufflinks 14.09     High High
cufflinks 9.539        
cufflinks 8.58        
cufflinks 13.55     High  
cufflinks 17.965     High High
cufflinks 8.919        
cufflinks 8.182        
cufflinks 8.518        
cufflinks 9.11        
cufflinks 14.656     High High
cufflinks 8.632        
cufflinks 12.759     High  
cufflinks 10.601        
cufflinks 14.423     High High

0 Strain