Gene : Bradi3g55690 B. distachyon v3.1
Defline:  (1 of 1) PTHR36749:SF1 - F7O18.3 PROTEIN Genomic Order:  6925
Name:  ? Bradi3g55690 Secondary Identifier:  ? PAC:32821586
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g55690 0.5kb upstream 0.5kb upstream 3752 true Bd3: 55610581-55614332 Brachypodium distachyon
Bradi3g55690 0.5kb upstream 0.5kb upstream 500 false Bd3: 55613833-55614332 Brachypodium distachyon
Bradi3g55690 0.5kb downstream 0.5kb downstream 3752 true Bd3: 55610081-55613832 Brachypodium distachyon
Bradi3g55690 0.5kb downstream 0.5kb downstream 500 false Bd3: 55610081-55610580 Brachypodium distachyon
Bradi3g55690 1.0kb upstream 1.0kb upstream 4252 true Bd3: 55610581-55614832 Brachypodium distachyon
Bradi3g55690 1.0kb upstream 1.0kb upstream 1000 false Bd3: 55613833-55614832 Brachypodium distachyon
Bradi3g55690 1.0kb downstream 1.0kb downstream 4252 true Bd3: 55609581-55613832 Brachypodium distachyon
Bradi3g55690 1.0kb downstream 1.0kb downstream 1000 false Bd3: 55609581-55610580 Brachypodium distachyon
Bradi3g55690 2.0kb upstream 2.0kb upstream 5252 true Bd3: 55610581-55615832 Brachypodium distachyon
Bradi3g55690 2.0kb upstream 2.0kb upstream 2000 false Bd3: 55613833-55615832 Brachypodium distachyon
Bradi3g55690 2.0kb downstream 2.0kb downstream 5252 true Bd3: 55608581-55613832 Brachypodium distachyon
Bradi3g55690 2.0kb downstream 2.0kb downstream 2000 false Bd3: 55608581-55610580 Brachypodium distachyon
Bradi3g55690 5.0kb upstream 5.0kb upstream 8252 true Bd3: 55610581-55618832 Brachypodium distachyon
Bradi3g55690 5.0kb upstream 5.0kb upstream 5000 false Bd3: 55613833-55618832 Brachypodium distachyon
Bradi3g55690 5.0kb downstream 5.0kb downstream 8252 true Bd3: 55605581-55613832 Brachypodium distachyon
Bradi3g55690 5.0kb downstream 5.0kb downstream 5000 false Bd3: 55605581-55610580 Brachypodium distachyon
Bradi3g55690 10.0kb upstream 10.0kb upstream 13252 true Bd3: 55610581-55623832 Brachypodium distachyon
Bradi3g55690 10.0kb upstream 10.0kb upstream 10000 false Bd3: 55613833-55623832 Brachypodium distachyon
Bradi3g55690 10.0kb downstream 10.0kb downstream 13252 true Bd3: 55600581-55613832 Brachypodium distachyon
Bradi3g55690 10.0kb downstream 10.0kb downstream 10000 false Bd3: 55600581-55610580 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569892 5269 Grass View MSA
122045899 5273 Angiosperm View MSA
121344385 5274 Embryophyte View MSA
123424865 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.24       High
cufflinks 5.979        
cufflinks 5.39        
cufflinks 4.918        
cufflinks 3.769        
cufflinks 5.063        
cufflinks 5.417        
cufflinks 5.363        
cufflinks 5.28        
cufflinks 4.032        
cufflinks 3.582       Low
cufflinks 4.053        
cufflinks 2.992       Low
cufflinks 3.216       Low
cufflinks 4.231        
cufflinks 5.109        
cufflinks 4.576        
cufflinks 8.219       High
cufflinks 5.933        
cufflinks 2.317       Low
cufflinks 5.055        
cufflinks 4.889        
cufflinks 5.117        
cufflinks 4.622        
cufflinks 5.404        
cufflinks 4.379        
cufflinks 4.106        
cufflinks 4.459        
cufflinks 4.851        
cufflinks 4.657        

0 Strain